Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC103705.1-201ENST00000619013 241 ntBASIC2.64□□□□□ -1.99
TO15178 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
TO15178 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.63□□□□□ -1.99
TO15178 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
TO15178 RNU6-748P-201ENST00000384648 107 ntBASIC2.63□□□□□ -1.99
TO15178 MIR147B-201ENST00000390185 80 ntBASIC2.63□□□□□ -1.99
TO15178 FTH1P15-201ENST00000406984 280 ntBASIC2.63□□□□□ -1.99
TO15178 AL451074.5-201ENST00000415894 435 ntBASIC2.63□□□□□ -1.99
TO15178 AL096701.2-201ENST00000416920 238 ntBASIC2.63□□□□□ -1.99
TO15178 AC104389.3-201ENST00000445629 235 ntBASIC2.63□□□□□ -1.99
TO15178 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.63□□□□□ -1.99
TO15178 AC107626.1-201ENST00000471084 183 ntBASIC2.63□□□□□ -1.99
TO15178 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.63□□□□□ -1.99
TO15178 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.63□□□□□ -1.99
TO15178 SNORA14.1-201ENST00000516113 141 ntBASIC2.63□□□□□ -1.99
TO15178 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.63□□□□□ -1.99
TO15178 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.63□□□□□ -1.99
TO15178 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.63□□□□□ -1.99
TO15178 AC008121.1-201ENST00000603244 268 ntBASIC2.63□□□□□ -1.99
TO15178 AP000787.2-201ENST00000604432 568 ntBASIC2.63□□□□□ -1.99
TO15178 ATP1B3P1-201ENST00000605365 821 ntBASIC2.63□□□□□ -1.99
TO15178 AC135507.2-201ENST00000612443 309 ntBASIC2.63□□□□□ -1.99
TO15178 AC011890.2-201ENST00000613393 294 ntBASIC2.63□□□□□ -1.99
TO15178 AC010378.1-201ENST00000619270 362 ntBASIC2.63□□□□□ -1.99
TO15178 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.63□□□□□ -1.99
TO15178 Z69720.2-201ENST00000624755 279 ntBASIC2.63□□□□□ -1.99
TO15178 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TO15178 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.63□□□□□ -1.99
TO15178 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
TO15178 AC121333.1-201ENST00000567488 2709 ntBASIC2.62□□□□□ -1.99
TO15178 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
TO15178 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.62□□□□□ -1.99
TO15178 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.62□□□□□ -1.99
TO15178 RNU6-858P-201ENST00000362436 107 ntBASIC2.62□□□□□ -1.99
TO15178 AC096664.2-201ENST00000411843 406 ntBASIC2.62□□□□□ -1.99
TO15178 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.62□□□□□ -1.99
TO15178 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.62□□□□□ -1.99
TO15178 AL365400.1-201ENST00000431854 640 ntBASIC2.62□□□□□ -1.99
TO15178 RPS29P6-201ENST00000438196 145 ntBASIC2.62□□□□□ -1.99
TO15178 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.62□□□□□ -1.99
TO15178 AP000852.1-201ENST00000472460 573 ntBASIC2.62□□□□□ -1.99
TO15178 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.62□□□□□ -1.99
TO15178 MRPL42P6-201ENST00000486397 371 ntBASIC2.62□□□□□ -1.99
TO15178 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.62□□□□□ -1.99
TO15178 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.62□□□□□ -1.99
TO15178 SCARNA11.3-201ENST00000517276 130 ntBASIC2.62□□□□□ -1.99
TO15178 AC109329.2-201ENST00000519658 482 ntBASIC2.62□□□□□ -1.99
TO15178 RPL7P20-201ENST00000520308 745 ntBASIC2.62□□□□□ -1.99
TO15178 AC009163.5-201ENST00000575421 637 ntBASIC2.62□□□□□ -1.99
TO15178 RPL12P50-201ENST00000603116 116 ntBASIC2.62□□□□□ -1.99
TO15178 AL356280.1-201ENST00000603614 379 ntBASIC2.62□□□□□ -1.99
TO15178 AL670379.10-201ENST00000604330 253 ntBASIC2.62□□□□□ -1.99
TO15178 AL670379.9-201ENST00000605428 253 ntBASIC2.62□□□□□ -1.99
TO15178 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TO15178 RMST_3.1-201ENST00000611651 109 ntBASIC2.62□□□□□ -1.99
TO15178 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TO15178 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.62□□□□□ -1.99
TO15178 MIR3662-201ENST00000637030 95 ntBASIC2.62□□□□□ -1.99
TO15178 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.62□□□□□ -1.99
TO15178 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TO15178 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TO15178 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
TO15178 RNU6-942P-201ENST00000363002 107 ntBASIC2.61□□□□□ -1.99
TO15178 RNU5E-7P-201ENST00000365290 117 ntBASIC2.61□□□□□ -1.99
TO15178 U3.26-201ENST00000391236 204 ntBASIC2.61□□□□□ -1.99
TO15178 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.61□□□□□ -1.99
TO15178 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.61□□□□□ -1.99
TO15178 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.61□□□□□ -1.99
TO15178 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.61□□□□□ -1.99
TO15178 AC107083.1-201ENST00000439643 279 ntBASIC2.61□□□□□ -1.99
TO15178 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.61□□□□□ -1.99
TO15178 AL135938.1-201ENST00000443141 297 ntBASIC2.61□□□□□ -1.99
TO15178 AC012308.1-201ENST00000451232 178 ntBASIC2.61□□□□□ -1.99
TO15178 RPS29P25-201ENST00000481709 171 ntBASIC2.61□□□□□ -1.99
TO15178 AC090096.1-201ENST00000489168 390 ntBASIC2.61□□□□□ -1.99
TO15178 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TO15178 TBCAP3-201ENST00000512475 312 ntBASIC2.61□□□□□ -1.99
TO15178 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.61□□□□□ -1.99
TO15178 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.61□□□□□ -1.99
TO15178 HPRT1P3-201ENST00000539521 576 ntBASIC2.61□□□□□ -1.99
TO15178 AC023050.3-201ENST00000541142 333 ntBASIC2.61□□□□□ -1.99
TO15178 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.61□□□□□ -1.99
TO15178 CR383656.8-201ENST00000549046 145 ntBASIC2.61□□□□□ -1.99
TO15178 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.61□□□□□ -1.99
TO15178 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.61□□□□□ -1.99
TO15178 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.61□□□□□ -1.99
TO15178 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TO15178 AL020991.1-201ENST00000612314 373 ntBASIC2.61□□□□□ -1.99
TO15178 uc_338.14-201ENST00000613162 166 ntBASIC2.61□□□□□ -1.99
TO15178 RMST_7.1-201ENST00000621935 268 ntBASIC2.61□□□□□ -1.99
TO15178 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
TO15178 RNU6-37P-201ENST00000362692 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNA5SP393-201ENST00000363423 117 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-11P-201ENST00000364234 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-522P-201ENST00000364497 107 ntBASIC2.6□□□□□ -1.99
TO15178 Y_RNA.248-201ENST00000364501 109 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-7-201ENST00000364784 107 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-8-201ENST00000365467 107 ntBASIC2.6□□□□□ -1.99
TO15178 Y_RNA.373-201ENST00000365600 103 ntBASIC2.6□□□□□ -1.99
TO15178 RNU6-25P-201ENST00000383873 107 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms