Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MIR4667-201ENST00000578933 66 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.24□□□□□ -2.37
CACNA1AO00555 AP000403.1-201ENST00000603349 851 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AC069294.1-201ENST00000608397 350 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AC110792.4-201ENST00000609843 298 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AP005212.4-201ENST00000614206 710 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AL121890.5-201ENST00000620848 304 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AP003400.6-201ENST00000624698 740 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 HSBP1P2-201ENST00000299671 229 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 RNU6-1226P-201ENST00000384317 107 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CACNA1AO00555 MIR1302-8-201ENST00000408342 128 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 RNU2-43P-201ENST00000410306 190 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 RPP40P1-201ENST00000426762 456 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 YWHAZP8-201ENST00000436935 731 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AC241584.1-201ENST00000438469 1241 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.24□□□□□ -2.37
CACNA1AO00555 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.24□□□□□ -2.37
CACNA1AO00555 AC021739.1-201ENST00000559631 174 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AC012669.1-201ENST00000603209 283 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AC008147.4-201ENST00000617570 1204 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 AC068057.2-201ENST00000624047 895 ntBASIC0.24□□□□□ -2.37
CACNA1AO00555 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.24□□□□□ -2.37
CACNA1AO00555 MIR608-201ENST00000384820 100 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 RNU11-3P-201ENST00000391111 133 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 MIR1303-201ENST00000408625 86 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 RNU2-7P-201ENST00000410794 178 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 RPL21P111-201ENST00000418453 477 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 EIF4EP2-201ENST00000422816 654 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.23□□□□□ -2.37
CACNA1AO00555 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.23□□□□□ -2.37
CACNA1AO00555 GTF2IP13-201ENST00000438487 386 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.23□□□□□ -2.37
CACNA1AO00555 RPL26P6-201ENST00000440913 438 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 RAC1P7-201ENST00000445367 377 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.23□□□□□ -2.37
CACNA1AO00555 RPS26P55-201ENST00000471178 356 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.23□□□□□ -2.37
CACNA1AO00555 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CACNA1AO00555 RNU6-488P-201ENST00000515918 99 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 AC136628.3-201ENST00000521868 290 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.23□□□□□ -2.37
CACNA1AO00555 AL356432.3-201ENST00000568952 465 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 AC040174.2-201ENST00000602701 465 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 AL138478.1-201ENST00000612252 832 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 AC073349.3-201ENST00000617616 186 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 SNORD51-201ENST00000384320 80 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 RNU6-1035P-201ENST00000384477 107 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 Y_RNA.505-201ENST00000384489 102 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 RNU6-748P-201ENST00000384648 107 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 MIR325-201ENST00000385260 98 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 MIR1290-201ENST00000408735 78 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 RNU6-272P-201ENST00000411028 104 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 FGF7P5-201ENST00000441829 291 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 DDX3P2-201ENST00000446138 111 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 AC109327.2-201ENST00000448339 378 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 HSPE1P13-201ENST00000451143 297 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 RNU6-775P-201ENST00000459318 96 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
CACNA1AO00555 RNU7-40P-201ENST00000516397 64 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.23□□□□□ -2.37
CACNA1AO00555 AC105224.1-201ENST00000587055 421 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.23□□□□□ -2.37
CACNA1AO00555 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.23□□□□□ -2.37
CACNA1AO00555 AC121334.2-201ENST00000605387 271 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 AC006213.4-201ENST00000616184 634 ntBASIC0.23□□□□□ -2.37
CACNA1AO00555 RNU2-15P-201ENST00000410692 191 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 AC023141.4-201ENST00000412031 328 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 AL160275.3-201ENST00000423876 471 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.22□□□□□ -2.37
CACNA1AO00555 AC108729.1-201ENST00000487812 947 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.22□□□□□ -2.37
CACNA1AO00555 AL133373.1-201ENST00000497098 94 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.22□□□□□ -2.37
CACNA1AO00555 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.22□□□□□ -2.37
CACNA1AO00555 MTCYBP16-201ENST00000509187 1129 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.22□□□□□ -2.37
CACNA1AO00555 RNU6-202P-201ENST00000515998 96 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.22□□□□□ -2.37
CACNA1AO00555 AL359212.1-201ENST00000556608 614 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 AC004584.2-201ENST00000570407 410 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 AC005832.2-201ENST00000538921 1430 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CACNA1AO00555 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
CACNA1AO00555 SNORA32.1-201ENST00000364514 115 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 RNA5SP240-201ENST00000365355 128 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.22□□□□□ -2.37
CACNA1AO00555 AC092573.2-201ENST00000434546 243 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 AL049734.2-201ENST00000441066 616 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.22□□□□□ -2.37
CACNA1AO00555 OR52A4P-202ENST00000481634 799 ntBASIC0.22□□□□□ -2.37
CACNA1AO00555 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.22□□□□□ -2.37
CACNA1AO00555 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.22□□□□□ -2.37
CACNA1AO00555 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.22□□□□□ -2.37
CACNA1AO00555 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.22□□□□□ -2.37
CACNA1AO00555 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.22□□□□□ -2.37
CACNA1AO00555 U1.36-201ENST00000620684 176 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms