Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 MTND2P33-201ENST00000506452 1031 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AC074344.1-201ENST00000512823 224 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AC104136.1-201ENST00000512969 394 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 RNU6-232P-201ENST00000517144 64 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AC008015.1-201ENST00000555505 465 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 MIR4319-201ENST00000577285 85 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 MIR4444-1-201ENST00000581696 74 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 MIR3935-201ENST00000583472 104 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 MIR4444-2-201ENST00000584390 74 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AC122133.1-201ENST00000613964 233 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 AC063943.3-201ENST00000615562 356 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 U1.36-201ENST00000620684 176 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 uc_338.20-201ENST00000621563 178 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 MIR6132-201ENST00000622083 109 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.52□□□□□ -2.17
SMKR1H3BMG3 U6.114-201ENST00000636407 96 ntBASIC1.52□□□□□ -2.17
SMKR1H3BMG3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SMKR1H3BMG3 RNU6-553P-201ENST00000364047 96 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
SMKR1H3BMG3 RNU6-45P-201ENST00000384471 107 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SMKR1H3BMG3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.51□□□□□ -2.17
SMKR1H3BMG3 EIF4EP2-201ENST00000422816 654 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 AC025750.2-201ENST00000442609 450 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 AC079781.2-201ENST00000446424 169 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 AC097462.2-201ENST00000504623 481 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SMKR1H3BMG3 RNA5SP281-201ENST00000516504 135 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 RNU6-410P-201ENST00000517006 107 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.51□□□□□ -2.17
SMKR1H3BMG3 MTND1P24-201ENST00000552175 861 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.51□□□□□ -2.17
SMKR1H3BMG3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.51□□□□□ -2.17
SMKR1H3BMG3 ANP32BP3-201ENST00000559213 706 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 AC098848.2-201ENST00000588023 330 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 MIR6075-201ENST00000620782 95 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 AL603839.4-201ENST00000624658 1005 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 Z69720.2-201ENST00000624755 279 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 U4.7-201ENST00000638126 106 ntBASIC1.51□□□□□ -2.17
SMKR1H3BMG3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
SMKR1H3BMG3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SMKR1H3BMG3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SMKR1H3BMG3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.5□□□□□ -2.17
SMKR1H3BMG3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SMKR1H3BMG3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SMKR1H3BMG3 RNU1-58P-201ENST00000362413 163 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 RNU6-743P-201ENST00000364151 106 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 RNU6-1222P-201ENST00000384615 107 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 MIR544A-201ENST00000384855 91 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.5□□□□□ -2.17
SMKR1H3BMG3 BTF3P7-201ENST00000407097 488 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 AL590556.1-201ENST00000423231 483 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 UBE2V1P4-201ENST00000425374 344 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.5□□□□□ -2.17
SMKR1H3BMG3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.5□□□□□ -2.17
SMKR1H3BMG3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.5□□□□□ -2.17
SMKR1H3BMG3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.5□□□□□ -2.17
SMKR1H3BMG3 RN7SL274P-201ENST00000492268 272 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 HMGB3P17-201ENST00000504195 649 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
SMKR1H3BMG3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.5□□□□□ -2.17
SMKR1H3BMG3 AC008413.1-201ENST00000511864 177 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 AP005660.1-201ENST00000522972 293 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 AP003072.2-201ENST00000527756 676 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.5□□□□□ -2.17
SMKR1H3BMG3 AC137800.2-201ENST00000574375 120 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 MIR4713-201ENST00000582691 75 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 AL022345.1-201ENST00000607292 135 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 AL442067.2-201ENST00000614033 363 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.5□□□□□ -2.17
SMKR1H3BMG3 AC008250.2-201ENST00000615261 205 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 YWHAEP7-203ENST00000622054 312 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 AC011155.2-201ENST00000623202 216 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 AF246928.1-201ENST00000623768 87 ntBASIC1.5□□□□□ -2.17
SMKR1H3BMG3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.49□□□□□ -2.17
SMKR1H3BMG3 RNU6-1287P-201ENST00000362914 107 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 Y_RNA.99-201ENST00000363138 105 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 Y_RNA.367-201ENST00000365544 101 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 RNU6-1060P-201ENST00000384664 107 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 MIR597-201ENST00000384968 97 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 RNU6-550P-201ENST00000391057 101 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 SNORA48.3-201ENST00000391081 134 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC027124.2-201ENST00000428249 105 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 GPR143P-201ENST00000434155 205 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC009961.2-201ENST00000435771 251 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC107083.1-201ENST00000439643 279 ntBASIC1.49□□□□□ -2.17
SMKR1H3BMG3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SMKR1H3BMG3 AC108938.1-201ENST00000451204 136 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms