Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU6-1035P-201ENST00000384477 107 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-817P-201ENST00000391083 104 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-903P-201ENST00000391270 109 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 RNU2-49P-201ENST00000410666 184 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 ZNF863P-201ENST00000426746 417 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AC137499.1-201ENST00000427602 88 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AC027124.2-201ENST00000428249 105 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AL669831.1-202ENST00000428504 417 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 GPM6BP2-201ENST00000432046 144 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 SNRPEP9-201ENST00000436794 238 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 GTF2IP13-201ENST00000438487 386 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 GPM6BP1-201ENST00000446387 144 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 MTND1P18-201ENST00000448191 573 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AC087884.1-201ENST00000469738 328 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 RPS27AP10-201ENST00000496103 208 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 RNA5SP401-201ENST00000515920 127 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 SNORA40.12-201ENST00000516329 111 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-677P-201ENST00000516914 101 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AC025755.1-201ENST00000521306 278 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 COX6CP5-201ENST00000527162 228 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 SNRPGP18-201ENST00000553000 214 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AL512360.1-201ENST00000555346 234 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 MIR3117-201ENST00000584034 78 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 MIR4658-201ENST00000584344 65 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AC080078.2-201ENST00000603766 501 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AP001330.5-201ENST00000607176 411 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AC013412.1-201ENST00000610687 192 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 RMST_3.1-201ENST00000611651 109 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 AC010378.1-201ENST00000619270 362 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.04□□□□□ -2.08
TRIM49D1C9J1S8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 RNU6-778P-201ENST00000363269 103 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 RNU1-52P-201ENST00000384190 164 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AL590002.1-201ENST00000406554 418 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 RNA5SP111-201ENST00000411386 101 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AL139156.1-201ENST00000412785 841 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AC104058.1-201ENST00000448028 297 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 RPS15AP27-201ENST00000449183 343 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AL583843.1-201ENST00000456070 346 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 RPL39P36-201ENST00000490784 156 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AL160314.1-201ENST00000490836 438 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AC079382.1-201ENST00000493346 557 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 MTND3P25-201ENST00000509243 135 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 RNA5SP503-201ENST00000517047 117 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 BNIP3P6-201ENST00000549284 499 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 MIR3935-201ENST00000583472 104 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AC017083.3-201ENST00000609955 700 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AC073308.1-201ENST00000623696 305 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM49D1C9J1S8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 ELF2P3-201ENST00000445099 1506 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1120P-201ENST00000362988 108 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1097P-201ENST00000363586 107 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-384P-201ENST00000364900 104 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-715P-201ENST00000365204 103 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 SNORA69-201ENST00000383895 132 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 SNORA16.2-201ENST00000390991 127 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-908P-201ENST00000410160 94 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1025P-201ENST00000410629 104 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 RNU6-1148P-201ENST00000410992 104 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 OR6C66P-201ENST00000414917 930 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AL356867.1-201ENST00000429623 299 ntBASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.02□□□□□ -2.09
TRIM49D1C9J1S8 RPL32P28-201ENST00000443577 397 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 249 ms