Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 RNU6-581P-201ENST00000516214 105 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 MIR3117-201ENST00000584034 78 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 MIR4293-201ENST00000584305 78 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 BNIP3P23-201ENST00000599655 511 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AC011458.1-201ENST00000604034 617 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AL031281.1-201ENST00000604049 488 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AC027449.1-201ENST00000608890 407 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AL109933.3-201ENST00000619095 188 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 AL391262.2-201ENST00000622466 494 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 MTND4P27-201ENST00000450813 1354 ntBASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.96□□□□□ -2.26
COL6A6A6NMZ7 RNY4P24-201ENST00000362735 96 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 RNU6-97P-201ENST00000363387 104 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 RNY3P9-201ENST00000384727 106 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 RNA5SP127-201ENST00000411051 133 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 RPL26P27-201ENST00000414397 437 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 MTND2P9-201ENST00000422293 931 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 MTND1P32-201ENST00000433043 938 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AL008629.1-201ENST00000438615 184 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AL714022.1-201ENST00000439897 151 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 RNU7-125P-201ENST00000458760 62 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 MTND4LP3-201ENST00000468320 276 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC116337.2-201ENST00000477662 156 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 LARP1BP2-201ENST00000486594 519 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC109927.2-201ENST00000506416 303 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 RNU6-927P-201ENST00000516199 100 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AP005902.1-201ENST00000521358 186 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 MTATP6P24-201ENST00000576835 677 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC090616.3-201ENST00000582184 217 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 HMGN1P30-201ENST00000589286 268 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC005332.10-201ENST00000612725 619 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC097655.1-201ENST00000635075 318 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 MTND1P37-201ENST00000636562 264 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC103710.2-202ENST00000641454 2853 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 RNU6-621P-201ENST00000364752 109 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 RNU6-234P-201ENST00000365229 104 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 RNU6-636P-201ENST00000384598 107 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 RNU1-78P-201ENST00000391248 165 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 U6atac.2-201ENST00000408644 118 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 PGBD4P6-201ENST00000421501 610 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 MTND5P25-201ENST00000430499 799 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC002381.1-201ENST00000447049 280 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 SNRPGP6-201ENST00000451124 220 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 RPL30P12-201ENST00000474666 353 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AL049874.1-201ENST00000489560 388 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 RNA5SP395-201ENST00000516567 118 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC011979.2-201ENST00000527568 352 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AP003122.4-201ENST00000530980 758 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC013828.2-201ENST00000532487 235 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 LINC00933-203ENST00000559812 219 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 MIR3973-201ENST00000579824 107 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 MIR544B-201ENST00000582372 78 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 UBE2L4-201ENST00000587688 464 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AC079248.2-201ENST00000623779 326 ntBASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.95□□□□□ -2.26
COL6A6A6NMZ7 Y_RNA.274-201ENST00000364714 101 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 MIR936-201ENST00000401264 98 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 MIR1302-8-201ENST00000408342 128 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 SNORD56-201ENST00000413522 71 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AL365496.1-201ENST00000426885 215 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 MTND3P1-201ENST00000441336 220 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 DYNLL1P5-201ENST00000467158 270 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 RPS15AP34-201ENST00000487776 387 ntBASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.94□□□□□ -2.26
COL6A6A6NMZ7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms