Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AL121978.1-201ENST00000402778 359 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 CCNG1P1-201ENST00000406783 885 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 RNU2-7P-201ENST00000410794 178 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 PSMA6P3-201ENST00000428242 164 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 HSPE1P9-201ENST00000440046 311 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 AL096829.2-201ENST00000446582 742 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 SNORA68.3-201ENST00000515906 83 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 RNU6-491P-201ENST00000516099 110 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 Y_RNA.676-201ENST00000516393 96 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 AC087854.1-201ENST00000519706 414 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 AP001429.1-201ENST00000602568 530 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 AC091057.3-201ENST00000602684 733 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 AC022387.2-201ENST00000604050 448 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 AC239868.4-201ENST00000608318 671 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 AC004908.3-201ENST00000610248 625 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 AL138726.1-201ENST00000614873 333 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 AC079416.3-201ENST00000624479 549 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
CPSF4LA6NMK7 MIR1295A-201ENST00000408463 79 ntBASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 CCDC58P2-201ENST00000417131 366 ntBASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 FTH1P12-201ENST00000432137 551 ntBASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 MTCO2P25-201ENST00000447065 681 ntBASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 AC105313.1-201ENST00000509121 353 ntBASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 RNA5SP437-201ENST00000517249 129 ntBASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 AC025423.5-201ENST00000550230 219 ntBASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 AC069114.2-201ENST00000604699 304 ntBASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 AC090578.1-201ENST00000604955 591 ntBASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 AC105148.1-201ENST00000604961 409 ntBASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 uc_338.15-201ENST00000615470 191 ntBASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.05□□□□□ -2.4
CPSF4LA6NMK7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 RNU4-79P-201ENST00000362764 141 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 RNU5E-8P-201ENST00000363502 116 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 Y_RNA.226-201ENST00000364337 114 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 SNORD12-201ENST00000391002 90 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 AL133475.1-201ENST00000404414 305 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 MIR1287-201ENST00000408492 90 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 RPS15AP9-201ENST00000439856 381 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 NEFMP1-201ENST00000443423 1006 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 AC092001.1-201ENST00000453012 261 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 AL441985.1-201ENST00000457727 251 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 AC130509.1-201ENST00000464158 433 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 RNU6-581P-201ENST00000516214 105 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 SNORA4-201ENST00000584302 138 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 DUXAP11-201ENST00000603858 526 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 AC079610.2-201ENST00000604818 690 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 AL590240.4-201ENST00000616908 390 ntBASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.04□□□□□ -2.4
CPSF4LA6NMK7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 MIRLET7D-201ENST00000362263 87 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 MTCYBP38-201ENST00000417160 1123 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 AL451054.2-201ENST00000420896 202 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 ELOCP14-201ENST00000428070 331 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 AC093422.3-201ENST00000428506 305 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 AC092423.1-201ENST00000430165 186 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 AL035398.1-201ENST00000430869 322 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 MTND1P28-201ENST00000435623 950 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 ELOCP7-201ENST00000439968 331 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 GAPDHP17-201ENST00000449858 1001 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 AL160314.1-201ENST00000490836 438 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 RN7SKP12-201ENST00000516275 143 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 RNU6-528P-201ENST00000516926 100 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 RNU6-703P-201ENST00000516946 107 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 KC877982.1-201ENST00000602313 470 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 Z83818.1-201ENST00000603584 150 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 AC098614.4-201ENST00000607601 462 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 AC004808.1-201ENST00000627671 721 ntBASIC0.03□□□□□ -2.4
CPSF4LA6NMK7 SNORD114-23-201ENST00000363536 72 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 RNU6-878P-201ENST00000384578 110 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 RNU6-910P-201ENST00000390844 107 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 RPL21P111-201ENST00000418453 477 ntBASIC0.02□□□□□ -2.41
CPSF4LA6NMK7 AC007435.1-201ENST00000421086 415 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms