Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LINC00933-203ENST00000559812 219 ntBASIC3.86□□□□□ -1.79
CCDC66A2RUB6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC66A2RUB6 AP000553.6-201ENST00000641242 118 ntBASIC3.86□□□□□ -1.79
CCDC66A2RUB6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC66A2RUB6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC66A2RUB6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC66A2RUB6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
CCDC66A2RUB6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC66A2RUB6 Y_RNA.39-201ENST00000362620 98 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CCDC66A2RUB6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AL138885.1-201ENST00000405921 675 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 MIR548F4-201ENST00000408515 105 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 RN7SKP202-201ENST00000410439 330 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 RN7SKP123-201ENST00000410732 291 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 NUP35P1-201ENST00000422734 947 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC66A2RUB6 HIGD1AP2-201ENST00000446367 280 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AC084357.1-201ENST00000473404 255 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 RN7SL323P-201ENST00000494712 295 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AC105758.1-201ENST00000506038 399 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC66A2RUB6 RNU4-77P-201ENST00000516692 156 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 RNU6-612P-201ENST00000516909 102 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AP000889.1-201ENST00000530968 660 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AC034105.4-201ENST00000568304 277 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AL158827.2-201ENST00000602494 330 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AL606534.2-204ENST00000635008 178 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 AL691447.3-201ENST00000635020 330 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC66A2RUB6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CCDC66A2RUB6 CUL1P1-201ENST00000509510 2425 ntBASIC3.85□□□□□ -1.79
CCDC66A2RUB6 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CCDC66A2RUB6 MTND5P7-201ENST00000413558 1798 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CCDC66A2RUB6 AC007656.2-201ENST00000624902 4547 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 RNU6-884P-201ENST00000363889 107 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 RNA5SP42-201ENST00000364278 115 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 RNU6-99P-201ENST00000364721 107 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 RNU6-336P-201ENST00000364891 107 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 Y_RNA.314-201ENST00000365114 102 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 Y_RNA.455-201ENST00000384230 98 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 RNU6-1035P-201ENST00000384477 107 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 Y_RNA.533-201ENST00000384596 114 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 SNORA48.7-201ENST00000391302 135 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 RPS29P13-201ENST00000402041 169 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 AL353705.1-201ENST00000433468 480 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 RPS29P7-201ENST00000439662 171 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC66A2RUB6 AC006026.2-201ENST00000457376 180 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 AP004607.1-201ENST00000524456 203 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC66A2RUB6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC66A2RUB6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.84□□□□□ -1.79
CCDC66A2RUB6 AMZ2P1-203ENST00000565833 850 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC66A2RUB6 AC012468.1-201ENST00000604888 430 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 AC008962.1-201ENST00000605729 304 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC66A2RUB6 HMGB1P24-202ENST00000615653 685 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 7SK.10-201ENST00000621414 298 ntBASIC3.84□□□□□ -1.79
CCDC66A2RUB6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CCDC66A2RUB6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC66A2RUB6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CCDC66A2RUB6 MTND5P9-201ENST00000503854 1755 ntBASIC3.84□□□□□ -1.8
CCDC66A2RUB6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.84□□□□□ -1.8
CCDC66A2RUB6 ZNF299P-201ENST00000406845 1804 ntBASIC3.84□□□□□ -1.8
CCDC66A2RUB6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC66A2RUB6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC66A2RUB6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC66A2RUB6 SNORD56.3-201ENST00000363507 71 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 RNU6-196P-201ENST00000384315 107 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 MIR554-201ENST00000384874 96 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 MIR518D-201ENST00000385014 87 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 Y_RNA.645-201ENST00000391229 102 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC66A2RUB6 RNU6-1156P-201ENST00000410365 100 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 Y_RNA.605-201ENST00000410577 105 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 AL591419.1-201ENST00000427423 339 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC66A2RUB6 AC098831.1-201ENST00000440661 216 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC66A2RUB6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC66A2RUB6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC66A2RUB6 U3.44-201ENST00000458938 192 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC66A2RUB6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC66A2RUB6 RNU6-579P-201ENST00000516879 102 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 AC104027.1-201ENST00000521887 300 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC66A2RUB6 RN7SL703P-201ENST00000578485 302 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC66A2RUB6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC66A2RUB6 AC019176.2-201ENST00000611579 315 ntBASIC3.83□□□□□ -1.8
CCDC66A2RUB6 AL132822.1-201ENST00000617063 513 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms