Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RNU6-1080P-201ENST00000383982 107 ntBASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC138623.1-201ENST00000418060 216 ntBASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 snoU13.9-201ENST00000458927 103 ntBASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 snoU13.18-201ENST00000459483 104 ntBASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RPL30P12-201ENST00000474666 353 ntBASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MED28P2-201ENST00000475771 317 ntBASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC027338.1-201ENST00000514840 825 ntBASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU6-113P-201ENST00000516653 101 ntBASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU6-965P-201ENST00000516721 96 ntBASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC109329.1-201ENST00000518744 317 ntBASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AP000907.2-201ENST00000530827 353 ntBASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 FAM106DP-201ENST00000586416 501 ntBASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL358072.1-201ENST00000604156 575 ntBASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.82□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MTND5P33-201ENST00000571250 1450 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU6-288P-201ENST00000363690 104 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MIR520E-201ENST00000384867 87 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MIR222-201ENST00000384992 110 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 SNORA40C-201ENST00000391285 128 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MTCO1P56-201ENST00000401674 224 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 TIMM9P2-201ENST00000419324 266 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RPL17P35-201ENST00000432217 549 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 USP9YP35-201ENST00000435696 412 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 CALM1P1-201ENST00000442082 433 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL078601.1-201ENST00000444542 271 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 GDI2P2-201ENST00000445131 608 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC245517.4-201ENST00000448601 281 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU7-59P-201ENST00000459101 61 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 OR2A41P-201ENST00000473586 105 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC025465.3-201ENST00000510570 311 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU6-902P-201ENST00000517212 91 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC018630.3-201ENST00000542637 96 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC025678.1-201ENST00000567861 338 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC005668.1-201ENST00000571142 476 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 SNORA4-201ENST00000584302 138 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC012065.4-201ENST00000602445 679 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC005776.1-201ENST00000603164 290 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 SNORD114-21-201ENST00000606412 72 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL133445.2-201ENST00000611191 527 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 uc_338.15-201ENST00000615470 191 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC104985.3-201ENST00000623479 597 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL136313.1-201ENST00000624804 202 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL163152.1-201ENST00000642001 374 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC092125.1-201ENST00000562568 1995 ntBASIC0.81□□□□□ -2.28
TCRBV4S1A1TA0A5B7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 Y_RNA.40-201ENST00000362645 93 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU1-93P-201ENST00000364704 169 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU6-166P-201ENST00000384371 107 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL953862.1-201ENST00000423016 168 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RPS27P16-201ENST00000425758 201 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MTCO1P44-201ENST00000441935 243 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MTND1P18-201ENST00000448191 573 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AP000542.1-201ENST00000448473 371 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC112492.4-201ENST00000456549 352 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RPS29P1-201ENST00000465274 159 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RPL39P36-201ENST00000490784 156 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 OR8K2P-201ENST00000524645 927 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL132657.2-201ENST00000564417 358 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL512347.1-201ENST00000566420 503 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC002400.1-201ENST00000569310 726 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC136618.2-201ENST00000575091 400 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 BNIP3P30-201ENST00000601184 574 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 PCMTD1P7-201ENST00000634506 357 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AL512643.1-201ENST00000635735 524 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 AC006927.2-201ENST00000639256 389 ntBASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TCRBV4S1A1TA0A5B7 HAUS6P2-201ENST00000433254 2404 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 MIR302D-201ENST00000362275 68 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU6-858P-201ENST00000362436 107 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 Y_RNA.99-201ENST00000363138 105 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU6-529P-201ENST00000363383 104 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU6-1284P-201ENST00000363701 100 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNU6-743P-201ENST00000364151 106 ntBASIC0.79□□□□□ -2.28
TCRBV4S1A1TA0A5B7 RNY1P14-201ENST00000384426 108 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms