Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AP000942.4-201ENST00000604811 241 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AP003122.5-201ENST00000527668 3766 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 AC090740.1-201ENST00000623193 2262 ntBASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.17□□□□□ -1.9
TCRBV5S1A1TA0A578 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AL133412.1-201ENST00000380194 2992 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AC022336.2-201ENST00000568966 2538 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 RPL9P7-201ENST00000330965 580 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 Y_RNA.148-201ENST00000363557 117 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 U3.42-201ENST00000408746 214 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 RNU6-325P-201ENST00000411132 105 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AC098614.2-201ENST00000426040 255 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 RPS15AP10-201ENST00000432472 382 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AL513043.1-201ENST00000439124 535 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 BX510359.1-201ENST00000456973 237 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 RPL9P9-202ENST00000466501 579 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 RPL23AP45-201ENST00000476406 468 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 RPL32P34-201ENST00000486380 400 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AC068781.1-201ENST00000488231 618 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 PTP4A1P4-201ENST00000512479 322 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AC109479.2-201ENST00000517842 174 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 CPDP1-201ENST00000579660 283 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 MIR4273-201ENST00000582824 84 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AC008121.1-201ENST00000603244 268 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AC018889.1-201ENST00000605372 397 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AL121917.1-203ENST00000605534 577 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AC008121.3-201ENST00000618726 433 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AC091925.1-201ENST00000623204 462 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 U6.99-201ENST00000637524 83 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 AL672296.1-201ENST00000427780 2158 ntBASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TCRBV5S1A1TA0A578 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.15□□□□□ -1.9
TCRBV5S1A1TA0A578 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TCRBV5S1A1TA0A578 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TCRBV5S1A1TA0A578 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 MIR22-201ENST00000362190 85 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 RNA5SP374-201ENST00000362939 125 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 Y_RNA.428-201ENST00000384078 102 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-174P-201ENST00000410406 106 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 AL159169.1-201ENST00000421119 127 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 AC011816.1-201ENST00000441346 546 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 RPL37P4-201ENST00000448908 268 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 RN7SL633P-201ENST00000488974 297 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 SNORD116.3-201ENST00000517176 78 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 CASP1P1-201ENST00000526345 212 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 MIR3186-201ENST00000577404 85 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 SRGNP1-201ENST00000603392 451 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 FTX_3.1-201ENST00000610451 147 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 AC006157.1-201ENST00000611750 366 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 MTND4P1-201ENST00000457501 1466 ntBASIC3.15□□□□□ -1.91
TCRBV5S1A1TA0A578 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 MTND5P16-201ENST00000460269 1703 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 FAM35BP-202ENST00000497389 3337 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 FTLP6-201ENST00000355274 422 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 Y_RNA.158-201ENST00000363651 101 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-827P-201ENST00000365553 106 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 RNU6-217P-201ENST00000384164 104 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 MRPL42P3-201ENST00000401492 326 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 AL513475.1-201ENST00000406602 315 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 RNA5SP274-201ENST00000410484 108 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 AC008267.5-201ENST00000424928 265 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 AL160004.2-201ENST00000432935 350 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 MTND3P2-201ENST00000438452 342 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 MTND5P22-201ENST00000458380 195 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 AL135752.1-201ENST00000479477 471 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 Y_RNA.720-201ENST00000517166 92 ntBASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.14□□□□□ -1.91
TCRBV5S1A1TA0A578 DNAJC8P1-201ENST00000554535 372 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms