Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC007677.1-201ENST00000445757 515 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 AC104058.1-201ENST00000448028 297 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 AC003071.1-201ENST00000451219 789 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 BTF3P15-201ENST00000455606 336 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 MTCO3P9-201ENST00000506989 781 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 AC104806.1-201ENST00000508720 308 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 MTCO2P4-201ENST00000517968 247 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 LINC00933-203ENST00000559812 219 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 DEFB122-202ENST00000569013 197 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 MIR4775-201ENST00000581168 75 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 MIR3199-1-201ENST00000582434 88 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 MIR4658-201ENST00000584344 65 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 AC002984.1-201ENST00000591692 448 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 AC005332.10-201ENST00000612725 619 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 MIR6845-201ENST00000613182 61 ntBASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SMIM28A0A1B0GU29 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 MTND5P17-201ENST00000418405 1603 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 OR56A5-201ENST00000340110 738 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 MIR412-201ENST00000362142 91 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 Y_RNA.51-201ENST00000362725 102 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 RNU6-371P-201ENST00000364283 108 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 RNU6-456P-201ENST00000384493 107 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 RNU6-1179P-201ENST00000384667 107 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 RNU6-19P-201ENST00000384718 107 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 SNORA80E-201ENST00000384744 137 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 MIR583-201ENST00000384846 75 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 MIR524-201ENST00000385242 87 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 MIR454-201ENST00000390180 115 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 SNORA40.18-201ENST00000391200 128 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 SNORA26.9-201ENST00000391322 122 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 AC068050.1-201ENST00000394891 380 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 FTH1P15-201ENST00000406984 280 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 RNA5SP111-201ENST00000411386 101 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 CDK8P2-201ENST00000415020 547 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 PIGFP2-201ENST00000421400 651 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 AC003685.2-201ENST00000422795 395 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 RPL30P4-201ENST00000429309 333 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 SNORA25.11-201ENST00000515935 105 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 SNORA31.15-201ENST00000516771 132 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 RNU1-40P-201ENST00000516816 164 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 RNU1-97P-201ENST00000516872 164 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 PRELID2P1-201ENST00000552837 301 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 SUB1P2-201ENST00000556401 297 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 AC092325.1-201ENST00000566449 554 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 MTCYBP33-201ENST00000575007 1130 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 PIGPP4-201ENST00000584447 307 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 AL049779.4-201ENST00000604500 156 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 AL670379.4-201ENST00000605279 254 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 RN7SKP299-201ENST00000606679 301 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 AC091834.1-201ENST00000614543 472 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 HMGB1P24-202ENST00000615653 685 ntBASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.07□□□□□ -2.08
SMIM28A0A1B0GU29 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 RNA5SP432-201ENST00000362480 116 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 RNU6-1097P-201ENST00000363586 107 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 RNU6-1280P-201ENST00000365211 107 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 RNU6-116P-201ENST00000384042 109 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 RNU6-1029P-201ENST00000384109 107 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 MIR218-1-201ENST00000384999 110 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 MIR10A-201ENST00000385043 110 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 MIR147B-201ENST00000390185 80 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 AL133475.1-201ENST00000404414 305 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 RNU2-9P-201ENST00000410194 145 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 RNU2-20P-201ENST00000410425 191 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 OR6C66P-201ENST00000414917 930 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 AL445685.2-201ENST00000422551 342 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 IFNA11P-201ENST00000446352 526 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 AC132479.1-201ENST00000449160 144 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 AC011753.1-201ENST00000451001 220 ntBASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.06□□□□□ -2.08
SMIM28A0A1B0GU29 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms