Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 RNU6-498P-201ENST00000459468 107 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 RPL26P26-201ENST00000480251 434 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 RPL30P1-201ENST00000488676 339 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-1261P-201ENST00000517194 104 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 AC022616.8-201ENST00000533569 253 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 AC018630.3-201ENST00000542637 96 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 LINC00557-201ENST00000563184 1279 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 AC012676.2-201ENST00000619258 186 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 FARSBP1-201ENST00000435808 1778 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC008163.1-202ENST00000636004 2889 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC138393.1-203ENST00000327086 343 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 Y_RNA.99-201ENST00000363138 105 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-216P-201ENST00000363282 104 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-112P-201ENST00000363599 104 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 MIR1267-201ENST00000408723 78 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC027644.1-201ENST00000419595 298 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 BX119904.4-201ENST00000424402 301 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AL669831.1-202ENST00000428504 417 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AL596276.1-201ENST00000434465 418 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 JTBP1-201ENST00000441314 247 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 BRK1P2-201ENST00000442875 223 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AP001025.1-201ENST00000486139 332 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC117454.1-201ENST00000491120 168 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC079140.2-201ENST00000506193 142 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC110760.3-202ENST00000515177 371 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC136932.1-201ENST00000574771 208 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 MIR3169-201ENST00000578032 83 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AP000860.1-201ENST00000605250 559 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 MIR98-201ENST00000606724 119 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC004492.1-201ENST00000607036 742 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC010975.3-201ENST00000618727 978 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC022513.1-201ENST00000624512 117 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 AC068205.3-201ENST00000636385 468 ntBASIC0.62□□□□□ -2.31
TRAV17A0A0B4J275 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-1280P-201ENST00000365211 107 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-26P-201ENST00000383985 107 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-296P-201ENST00000384608 107 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 AC119751.3-201ENST00000399720 670 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 AC006461.1-201ENST00000412637 326 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 EIF1P1-201ENST00000421436 341 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 CR848007.2-201ENST00000424918 787 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 USP9YP18-201ENST00000425912 695 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 AC245047.4-201ENST00000433189 144 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 AC092427.1-201ENST00000439177 601 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 MTCO3P45-201ENST00000443036 613 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 USP9YP17-201ENST00000444617 696 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 MTND2P4-201ENST00000445034 1004 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 OR2AQ1P-201ENST00000451972 200 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 RPL31P3-201ENST00000458430 332 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 snoU13.8-201ENST00000458890 104 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 RPL9P9-202ENST00000466501 579 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 AC004812.1-201ENST00000540773 146 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 TRAV32-201ENST00000553993 340 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 ZNF971P-201ENST00000562068 1249 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 Z82243.1-201ENST00000609432 473 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 MIR6779-201ENST00000617283 64 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 AC027335.2-201ENST00000624030 375 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 AC009541.1-201ENST00000438279 2662 ntBASIC0.61□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-223P-201ENST00000362830 107 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 SNORA29-201ENST00000384183 140 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 RNY1P4-201ENST00000384595 115 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 TPMTP2-201ENST00000414372 726 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 AL161935.2-201ENST00000414627 60 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 C8orf59P1-201ENST00000429930 303 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 TRIM60P13-201ENST00000432350 1283 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 GTF2IP3-201ENST00000433887 494 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 UBE2V1P8-201ENST00000437166 265 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 AC114982.1-201ENST00000469402 321 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 AC023194.1-201ENST00000493084 308 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 AP003465.2-201ENST00000602571 373 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 AC106800.4-201ENST00000614905 153 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 AL357080.1-201ENST00000617394 239 ntBASIC0.6□□□□□ -2.31
TRAV17A0A0B4J275 AC007742.2-201ENST00000618226 398 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms