Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC006927.2-201ENST00000639256 389 ntBASIC0.84□□□□□ -2.27
TRAV4A0A0B4J268 MTND5P33-201ENST00000571250 1450 ntBASIC0.84□□□□□ -2.28
TRAV4A0A0B4J268 MTND5P9-201ENST00000503854 1755 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 RNA5SP327-201ENST00000362494 101 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 RNU4-51P-201ENST00000364206 140 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 snoZ40.1-201ENST00000364540 72 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 RNU2-23P-201ENST00000410545 195 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 RNU6-1025P-201ENST00000410629 104 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 AC016831.2-201ENST00000417179 352 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 AL589872.1-201ENST00000426602 288 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 UBE2D3P3-201ENST00000426992 425 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 AC108667.1-201ENST00000428618 249 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 CBX3P6-201ENST00000430257 527 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 FTH1P12-201ENST00000432137 551 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 AL591704.1-201ENST00000432574 275 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 AL606517.1-201ENST00000446914 387 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 RPS29P29-201ENST00000456396 171 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 snoU13.14-201ENST00000459372 104 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 HMGB1P30-201ENST00000492455 606 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 RNU6-1315P-201ENST00000517187 99 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 MIR3937-201ENST00000580135 106 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 AC112220.2-201ENST00000605513 533 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 MIR1248-201ENST00000629190 106 ntBASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV4A0A0B4J268 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 AC245060.5-201ENST00000610778 3293 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 RNU5B-4P-201ENST00000363508 111 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 RNU6-622P-201ENST00000384272 103 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 RNU6-360P-201ENST00000390944 104 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 MTCO1P17-201ENST00000411522 491 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 AL359704.1-201ENST00000411586 781 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 AC083875.1-201ENST00000419509 405 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 MTCO2P1-201ENST00000424648 477 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 MTND5P25-201ENST00000430499 799 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 AL133373.1-201ENST00000497098 94 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 AC084364.2-201ENST00000546924 395 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 AC025678.1-201ENST00000567861 338 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 AL355472.4-201ENST00000610233 626 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 MIR6078-201ENST00000611069 100 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 AL590240.4-201ENST00000616908 390 ntBASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV4A0A0B4J268 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 RNU6-212P-201ENST00000362642 104 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 Y_RNA.40-201ENST00000362645 93 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 RNU6-482P-201ENST00000391068 107 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 Y_RNA.597-201ENST00000410463 100 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 DYNLT3P2-201ENST00000442517 295 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 MTND2P4-201ENST00000445034 1004 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 GDI2P2-201ENST00000445131 608 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 AP000542.1-201ENST00000448473 371 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 ZNF886P-201ENST00000450781 723 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 RNU6-333P-201ENST00000459117 107 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 SNORD97-201ENST00000459187 142 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 AC130509.1-201ENST00000464158 433 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 MTND1P16-201ENST00000465177 898 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 AL356057.1-201ENST00000533798 831 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 AC092325.1-201ENST00000566449 554 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 AC007363.1-201ENST00000604736 620 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 AC112220.3-201ENST00000605502 502 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 AC018926.1-201ENST00000616335 435 ntBASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV4A0A0B4J268 AC100821.1-201ENST00000523153 2479 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 MIR378A-201ENST00000362177 66 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 snoU2_19.1-201ENST00000362361 80 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 Y_RNA.255-201ENST00000364581 97 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 SNORA4.3-201ENST00000365564 137 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 RNU6-26P-201ENST00000383985 107 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 RNU6-296P-201ENST00000384608 107 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 RNU6-1222P-201ENST00000384615 107 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 RNA5SP390-201ENST00000410191 113 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AP1B1P2-201ENST00000416196 106 ntBASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAV4A0A0B4J268 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms