Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.2□□□□□ -2.38
TRAV30A0A087WSZ9 RNU5B-3P-201ENST00000516601 115 ntBASIC0.2□□□□□ -2.38
TRAV30A0A087WSZ9 RNU6-703P-201ENST00000516946 107 ntBASIC0.2□□□□□ -2.38
TRAV30A0A087WSZ9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.2□□□□□ -2.38
TRAV30A0A087WSZ9 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.2□□□□□ -2.38
TRAV30A0A087WSZ9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.2□□□□□ -2.38
TRAV30A0A087WSZ9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.2□□□□□ -2.38
TRAV30A0A087WSZ9 AC068787.1-201ENST00000623908 691 ntBASIC0.2□□□□□ -2.38
TRAV30A0A087WSZ9 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
TRAV30A0A087WSZ9 RNU1-133P-201ENST00000364867 167 ntBASIC0.19□□□□□ -2.38
TRAV30A0A087WSZ9 RNU6-1274P-201ENST00000384557 107 ntBASIC0.19□□□□□ -2.38
TRAV30A0A087WSZ9 MIR499A-201ENST00000384903 122 ntBASIC0.19□□□□□ -2.38
TRAV30A0A087WSZ9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.19□□□□□ -2.38
TRAV30A0A087WSZ9 RNU6-564P-201ENST00000410983 104 ntBASIC0.19□□□□□ -2.38
TRAV30A0A087WSZ9 BPTFP1-201ENST00000579209 492 ntBASIC0.19□□□□□ -2.38
TRAV30A0A087WSZ9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV30A0A087WSZ9 Z83818.1-201ENST00000603584 150 ntBASIC0.19□□□□□ -2.38
TRAV30A0A087WSZ9 KATNBL1P5-201ENST00000605015 517 ntBASIC0.19□□□□□ -2.38
TRAV30A0A087WSZ9 AP001596.2-201ENST00000608410 312 ntBASIC0.19□□□□□ -2.38
TRAV30A0A087WSZ9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV30A0A087WSZ9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 RNA5SP247-201ENST00000411181 105 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 AC010460.2-201ENST00000509054 677 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 MTCYBP40-201ENST00000509390 1135 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 AC093259.1-201ENST00000509755 300 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 SNORA3.4-201ENST00000515969 96 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 RNU6-528P-201ENST00000516926 100 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 AC103833.1-201ENST00000517442 172 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 MIR4711-201ENST00000578274 70 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 MIR5094-201ENST00000578766 85 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 AL158211.4-201ENST00000606988 584 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 AC098614.4-201ENST00000607601 462 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 AC009237.15-201ENST00000610252 501 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 AC130324.3-201ENST00000614165 542 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 MIR6134-201ENST00000617606 109 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 MTND4P14-201ENST00000435799 1354 ntBASIC0.18□□□□□ -2.38
TRAV30A0A087WSZ9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
TRAV30A0A087WSZ9 RNU1-39P-201ENST00000383897 165 ntBASIC0.17□□□□□ -2.38
TRAV30A0A087WSZ9 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.17□□□□□ -2.38
TRAV30A0A087WSZ9 MTND5P8-201ENST00000449817 1083 ntBASIC0.17□□□□□ -2.38
TRAV30A0A087WSZ9 AC130509.1-201ENST00000464158 433 ntBASIC0.17□□□□□ -2.38
TRAV30A0A087WSZ9 AC010631.1-201ENST00000474150 156 ntBASIC0.17□□□□□ -2.38
TRAV30A0A087WSZ9 AL121579.1-201ENST00000555129 305 ntBASIC0.17□□□□□ -2.38
TRAV30A0A087WSZ9 HMGB1P33-201ENST00000563485 527 ntBASIC0.17□□□□□ -2.38
TRAV30A0A087WSZ9 AL353765.1-201ENST00000605514 183 ntBASIC0.17□□□□□ -2.38
TRAV30A0A087WSZ9 AC107952.2-201ENST00000606048 486 ntBASIC0.17□□□□□ -2.38
TRAV30A0A087WSZ9 AC093913.1-201ENST00000614178 329 ntBASIC0.17□□□□□ -2.38
TRAV30A0A087WSZ9 AC093648.1-201ENST00000623546 606 ntBASIC0.17□□□□□ -2.38
TRAV30A0A087WSZ9 SNORD114-19-201ENST00000363072 75 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 Y_RNA.124-201ENST00000363339 93 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 Y_RNA.164-201ENST00000363709 102 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 RNU6-1280P-201ENST00000365211 107 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 RNU6-348P-201ENST00000384386 107 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 MIR936-201ENST00000401264 98 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 AL356776.1-201ENST00000406574 447 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 MTCO2P12-201ENST00000427426 682 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 MTCO3P17-201ENST00000443775 513 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 GAPDHP17-201ENST00000449858 1001 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 AC098869.1-201ENST00000481627 292 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 AC073410.2-201ENST00000603240 332 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 AL078603.1-201ENST00000603824 313 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 AC107304.1-201ENST00000604229 296 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 AL590240.4-201ENST00000616908 390 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 AC009509.4-201ENST00000619202 509 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 AC119674.1-220ENST00000641502 1048 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 AL589743.1-201ENST00000551932 2712 ntBASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
TRAV30A0A087WSZ9 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 RNU6-743P-201ENST00000364151 106 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 MIR520A-201ENST00000384862 85 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 MIR548B-201ENST00000385247 97 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 SNORD12-201ENST00000391002 90 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 RNU1-119P-201ENST00000391122 165 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 MIR942-201ENST00000401111 86 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 AL592310.1-201ENST00000414330 671 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 AL669831.1-202ENST00000428504 417 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 MTCO2P25-201ENST00000447065 681 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 AC116655.1-201ENST00000508324 901 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 RNU2-53P-201ENST00000516257 147 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 RNA5SP220-201ENST00000516298 104 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 AC092451.2-201ENST00000538746 658 ntBASIC0.15□□□□□ -2.39
TRAV30A0A087WSZ9 AC136619.2-201ENST00000563361 631 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms