Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AL354751.1-201ENST00000412768 1863 ntBASIC21.69■■□□□ 1.06
R3HCC1Q9Y3T6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 FAM201B-201ENST00000458407 597 ntBASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 AC023632.3-201ENST00000521633 145 ntBASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
R3HCC1Q9Y3T6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
R3HCC1Q9Y3T6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 KRT8P20-201ENST00000423953 1409 ntBASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 UNC93B5-201ENST00000530315 699 ntBASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 AC005829.2-201ENST00000571422 1056 ntBASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
R3HCC1Q9Y3T6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 BICD1-207ENST00000551848 1962 ntBASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 TNRC18P3-201ENST00000441896 2691 ntBASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
R3HCC1Q9Y3T6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms