Protein–RNA interactions for Protein: Q9JM96

Cdc42ep4, Cdc42 effector protein 4, mousemouse

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42ep4Q9JM96 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdc42ep4Q9JM96 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdc42ep4Q9JM96 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.71■□□□□ 0.43
Cdc42ep4Q9JM96 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdc42ep4Q9JM96 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdc42ep4Q9JM96 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.71■□□□□ 0.42
Cdc42ep4Q9JM96 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cdc42ep4Q9JM96 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cdc42ep4Q9JM96 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Phf7-203ENSMUST00000226565 1971 ntBASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Gm13186-201ENSMUST00000118031 316 ntBASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Gm1401-201ENSMUST00000122048 772 ntBASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Cdc42ep4Q9JM96 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Gm11594-201ENSMUST00000122313 162 ntBASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Mir5131-201ENSMUST00000175426 93 ntBASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc42ep4Q9JM96 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Gm6376-201ENSMUST00000209407 580 ntBASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc42ep4Q9JM96 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Gm7862-201ENSMUST00000121461 292 ntBASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Gm6296-201ENSMUST00000222599 943 ntBASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc42ep4Q9JM96 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.66■□□□□ 0.42
Cdc42ep4Q9JM96 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.66■□□□□ 0.42
Cdc42ep4Q9JM96 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdc42ep4Q9JM96 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdc42ep4Q9JM96 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cdc42ep4Q9JM96 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Cdc42ep4Q9JM96 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdc42ep4Q9JM96 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdc42ep4Q9JM96 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdc42ep4Q9JM96 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdc42ep4Q9JM96 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdc42ep4Q9JM96 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms