Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm27011-201ENSMUST00000182352 972 ntBASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Gm10566-201ENSMUST00000086739 996 ntBASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap3Q99LM2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cdk5rap3Q99LM2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap3Q99LM2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap3Q99LM2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap3Q99LM2 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.77■□□□□ 0.28
Cdk5rap3Q99LM2 Gm29707-201ENSMUST00000196325 491 ntBASIC16.77■□□□□ 0.28
Cdk5rap3Q99LM2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap3Q99LM2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap3Q99LM2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cdk5rap3Q99LM2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap3Q99LM2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap3Q99LM2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap3Q99LM2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap3Q99LM2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap3Q99LM2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms