Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Abca1P41233 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.42□□□□□ -0.26
Abca1P41233 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.42□□□□□ -0.26
Abca1P41233 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.42□□□□□ -0.26
Abca1P41233 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Abca1P41233 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.42□□□□□ -0.26
Abca1P41233 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Abca1P41233 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Abca1P41233 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.41□□□□□ -0.26
Abca1P41233 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Abca1P41233 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.41□□□□□ -0.26
Abca1P41233 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Abca1P41233 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.41□□□□□ -0.26
Abca1P41233 Gm6296-201ENSMUST00000222599 943 ntBASIC13.41□□□□□ -0.26
Abca1P41233 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Abca1P41233 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.41□□□□□ -0.26
Abca1P41233 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Abca1P41233 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Abca1P41233 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.41□□□□□ -0.26
Abca1P41233 Gm44450-201ENSMUST00000199528 114 ntBASIC13.41□□□□□ -0.26
Abca1P41233 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Abca1P41233 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Abca1P41233 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.4□□□□□ -0.26
Abca1P41233 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Abca1P41233 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Abca1P41233 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.4□□□□□ -0.26
Abca1P41233 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.4□□□□□ -0.26
Abca1P41233 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.4□□□□□ -0.26
Abca1P41233 Psmb5-202ENSMUST00000227257 622 ntBASIC13.4□□□□□ -0.26
Abca1P41233 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Abca1P41233 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Abca1P41233 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Abca1P41233 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Abca1P41233 Gm15165-201ENSMUST00000118140 502 ntBASIC13.39□□□□□ -0.27
Abca1P41233 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Abca1P41233 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Abca1P41233 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Abca1P41233 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Abca1P41233 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Abca1P41233 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Abca1P41233 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Abca1P41233 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Abca1P41233 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Abca1P41233 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Abca1P41233 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Abca1P41233 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.39□□□□□ -0.27
Abca1P41233 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Abca1P41233 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Abca1P41233 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.39□□□□□ -0.27
Abca1P41233 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms