Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 MAPK10-303ENST00000641324 3959 ntBASIC4.55□□□□□ -1.68
PCDHGA11Q9Y5H2 AC087190.4-201ENST00000574616 8334 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 CUL1P1-201ENST00000509510 2425 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 Y_RNA.7-201ENST00000362352 102 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 RNU1-20P-201ENST00000363314 162 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 RNU6-312P-201ENST00000364629 107 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 RNA5SP372-201ENST00000390836 115 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 RNU1-82P-201ENST00000390851 165 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 AL645927.1-201ENST00000396783 406 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 RNU2-54P-201ENST00000410299 190 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 RN7SL808P-201ENST00000496066 299 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 SCARNA22-201ENST00000503991 125 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 HMGB3P3-201ENST00000510526 400 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 AC006199.1-201ENST00000548728 219 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 AC105137.2-201ENST00000569073 466 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 AL391358.1-201ENST00000605342 190 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 AC015813.4-201ENST00000610469 179 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 AC092628.2-201ENST00000622492 339 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 AC018445.2-201ENST00000622987 260 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 AC015813.6-201ENST00000624409 5808 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 AC004944.1-201ENST00000517807 3059 ntBASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHGA11Q9Y5H2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 AC007496.3-201ENST00000624987 3443 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 RNA5SP502-201ENST00000362694 119 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 Y_RNA.357-201ENST00000365487 109 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 RNU6-449P-201ENST00000383914 107 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 SNORD116-18-201ENST00000383961 92 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 SNORA18.3-201ENST00000384122 132 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 AL591419.1-201ENST00000427423 339 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 AC079168.2-201ENST00000453977 416 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 AC091179.3-201ENST00000474761 144 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 AL049830.2-201ENST00000480072 201 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 RNU6-62P-201ENST00000516526 102 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 SNORA31.16-201ENST00000516773 139 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 IGKV2D-19-201ENST00000523346 262 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 MIR3145-201ENST00000580727 82 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 RPL7P50-201ENST00000600588 727 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 AL162713.1-201ENST00000604480 262 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 MIR7155-201ENST00000615925 56 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 MIR3674-201ENST00000636576 68 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 AC092435.4-201ENST00000623012 4159 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.53□□□□□ -1.68
PCDHGA11Q9Y5H2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 AC106871.1-201ENST00000568324 3102 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 RNU6-1272P-201ENST00000362776 107 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 U3.26-201ENST00000391236 204 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 MIR208B-201ENST00000401172 77 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 AL645733.1-201ENST00000402250 217 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 RN7SKP267-201ENST00000410381 285 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 RN7SKP53-201ENST00000411337 315 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 ELOCP21-201ENST00000412558 336 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 BTF3P11-201ENST00000426582 477 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 IFNA11P-201ENST00000446352 526 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 VWA8P1-201ENST00000510889 176 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 RN7SKP289-201ENST00000517244 295 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 HIGD1AP1-201ENST00000550979 275 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 MIR3923-201ENST00000579521 83 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.52□□□□□ -1.69
PCDHGA11Q9Y5H2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms