Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC020895.1-201ENST00000595362 272 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 AC011890.2-201ENST00000613393 294 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 AC084781.2-201ENST00000615568 161 ntBASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHGA3Q9Y5H0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.85
PCDHGA3Q9Y5H0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 Y_RNA.187-201ENST00000363918 113 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-487P-201ENST00000365430 104 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 SNORD116-20-201ENST00000384529 92 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-748P-201ENST00000384648 107 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 RNVU1-14-201ENST00000384770 164 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 RNA5SP424-201ENST00000390988 115 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 SNORA75.4-201ENST00000391278 119 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 FTH1P15-201ENST00000406984 280 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 AC074117.2-201ENST00000417130 397 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 MTND1P14-201ENST00000427400 950 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU7-152P-201ENST00000458982 64 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 AC107626.1-201ENST00000471084 183 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 MED28P2-201ENST00000475771 317 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 RAC1P2-201ENST00000511164 579 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 PHBP14-201ENST00000512887 367 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 ACA59.2-201ENST00000517061 156 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 AP005902.1-201ENST00000521358 186 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR3200-201ENST00000580767 85 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 AC044792.1-201ENST00000593294 196 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 AP000654.2-201ENST00000605633 586 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-91P-201ENST00000607774 107 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR7851-201ENST00000610611 160 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR8076-201ENST00000611401 83 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 AC135507.2-201ENST00000612443 309 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR8058-201ENST00000615737 89 ntBASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHGA3Q9Y5H0 MTND5P10-201ENST00000603719 1809 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 KPNA2P1-201ENST00000458289 1591 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 AC010889.1-201ENST00000566193 2666 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 Y_RNA.146-201ENST00000363549 102 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-799P-201ENST00000363567 107 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-1317P-201ENST00000364582 104 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-336P-201ENST00000364891 107 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 RNA5SP267-201ENST00000364893 126 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-843P-201ENST00000384454 104 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR767-201ENST00000390228 109 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU1-101P-201ENST00000391171 127 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 RBMY2UP-201ENST00000453474 324 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-612P-201ENST00000516909 102 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 AL442663.2-201ENST00000554385 511 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR4738-201ENST00000579134 87 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 AL137849.1-201ENST00000604767 169 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 MTND4LP32-201ENST00000636111 270 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 AC119674.1-207ENST00000641355 633 ntBASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-227P-201ENST00000362865 103 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU6-428P-201ENST00000362942 107 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 RNA5SP390-201ENST00000410191 113 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 Y_RNA.594-201ENST00000410373 140 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 RPL31P12-201ENST00000422587 358 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 AL133396.1-201ENST00000432048 687 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 AC236972.1-201ENST00000433225 199 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 ELOCP24-201ENST00000456370 334 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 AC097473.1-201ENST00000508142 408 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 RNU5B-3P-201ENST00000516601 115 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 SNORA31.18-201ENST00000517043 134 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 HPRT1P3-201ENST00000539521 576 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 MIR4273-201ENST00000582824 84 ntBASIC3.5□□□□□ -1.85
PCDHGA3Q9Y5H0 AC019159.1-201ENST00000605094 187 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms