Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 Y_RNA.2-201ENST00000362330 96 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 U8.8-201ENST00000365399 135 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 MIR521-1-201ENST00000384902 87 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 AL591034.2-201ENST00000402839 359 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 AP000275.1-201ENST00000411943 390 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 AF228730.4-201ENST00000421457 183 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 EIF4EP2-201ENST00000422816 654 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 CYCSP4-201ENST00000429682 331 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 CKS1BP7-201ENST00000522230 235 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 MIR3922-201ENST00000585192 84 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 AC011494.1-201ENST00000596454 237 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 AC096772.1-201ENST00000609146 564 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 AC091564.4-201ENST00000533934 2194 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 GABRG2-229ENST00000641017 3628 ntBASIC3.48□□□□□ -1.85
PCDHGA9Q9Y5G4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 XGY1-201ENST00000381172 446 ntBASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU6-43P-201ENST00000384302 107 ntBASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 RNVU1-14-201ENST00000384770 164 ntBASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 MIR147B-201ENST00000390185 80 ntBASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 EI24P2-201ENST00000397776 1076 ntBASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU2-49P-201ENST00000410666 184 ntBASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 PTP4A1P4-201ENST00000512479 322 ntBASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 Y_RNA.670-201ENST00000516255 105 ntBASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 AC010653.1-201ENST00000571108 881 ntBASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 AL391813.1-201ENST00000603098 260 ntBASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 AL355877.2-201ENST00000603670 358 ntBASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 AC080078.3-201ENST00000605407 463 ntBASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA9Q9Y5G4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PCDHGA9Q9Y5G4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 SNORD56.1-201ENST00000362913 68 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 RNU6-310P-201ENST00000384655 107 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 SNORA41-201ENST00000384675 132 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 RNU6-174P-201ENST00000410406 106 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 OSTCP8-201ENST00000445117 448 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 FTH1P25-201ENST00000447665 469 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 AC026784.1-201ENST00000507986 352 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 SCARNA13-201ENST00000516672 275 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 IGHV3-76-201ENST00000522465 295 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 AC109446.1-201ENST00000566172 220 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 AP001836.1-201ENST00000604675 523 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 AL627309.6-201ENST00000606857 840 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 uc_338.14-201ENST00000613162 166 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 AL591424.2-201ENST00000617023 128 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 AC110774.1-201ENST00000623567 2018 ntBASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHGA9Q9Y5G4 MAPK10-322ENST00000641485 4530 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 RNA5SP267-201ENST00000364893 126 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 Y_RNA.419-201ENST00000384041 102 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 Y_RNA.579-201ENST00000390939 94 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 SNORA75.6-201ENST00000391318 127 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 HLFP1-201ENST00000402375 499 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 AL358075.3-201ENST00000426289 226 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 MTCO2P12-201ENST00000427426 682 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 RN7SL601P-201ENST00000471221 293 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 AC093663.1-201ENST00000497190 394 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 GZMAP1-201ENST00000503054 631 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 AC093303.1-201ENST00000514549 295 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 RNU6-264P-201ENST00000517134 104 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 SNORA31.23-201ENST00000517219 133 ntBASIC3.45□□□□□ -1.86
PCDHGA9Q9Y5G4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms