Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.82□□□□□ -1.64
RTCBQ9Y3I0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 RNU6-629P-201ENST00000384061 103 ntBASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 PCNPP3-201ENST00000393579 471 ntBASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 HDGFP1-201ENST00000405943 252 ntBASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 AL356867.1-201ENST00000429623 299 ntBASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 RPS29P2-201ENST00000479278 136 ntBASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 AC006517.1-201ENST00000480485 328 ntBASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 RNU6-1256P-201ENST00000516539 103 ntBASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 SNORA31.20-201ENST00000517111 133 ntBASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 AP004371.1-201ENST00000525240 214 ntBASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 AC010186.2-204ENST00000537668 439 ntBASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 AC069240.1-201ENST00000548774 375 ntBASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 MIR3910-1-201ENST00000580936 111 ntBASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 AC240442.1-201ENST00000616055 283 ntBASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
RTCBQ9Y3I0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 RNU6-378P-201ENST00000384324 107 ntBASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 AL079342.1-201ENST00000401460 267 ntBASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 AC244098.2-201ENST00000422068 99 ntBASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 NDUFB4P7-201ENST00000423198 363 ntBASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 AC007560.1-201ENST00000426912 237 ntBASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 RPL21P40-201ENST00000428586 483 ntBASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 IGLV3-26-201ENST00000520756 302 ntBASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTCBQ9Y3I0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 RNU6-545P-201ENST00000362681 104 ntBASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 RNU5E-7P-201ENST00000365290 117 ntBASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 RNU6-166P-201ENST00000384371 107 ntBASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 Y_RNA.602-201ENST00000410535 92 ntBASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 CYCSP4-201ENST00000429682 331 ntBASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 U8.22-201ENST00000459141 133 ntBASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 SERF1AP1-201ENST00000514575 187 ntBASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 RNU6-1012P-201ENST00000516606 109 ntBASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 AC090617.3-201ENST00000573670 475 ntBASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 AC073657.2-201ENST00000605661 303 ntBASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 MIR6715B-201ENST00000637172 77 ntBASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 U4.7-201ENST00000638126 106 ntBASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTCBQ9Y3I0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 SNORD113-8-201ENST00000363497 74 ntBASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 RNU6-336P-201ENST00000364891 107 ntBASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 SNORD78.2-201ENST00000391076 69 ntBASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 MIR1290-201ENST00000408735 78 ntBASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 RNU2-20P-201ENST00000410425 191 ntBASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 AC007919.1-201ENST00000429380 217 ntBASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 NDUFB4P10-201ENST00000452541 359 ntBASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 RN7SL585P-201ENST00000470538 280 ntBASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 AC139453.3-201ENST00000493276 369 ntBASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 AC004024.1-201ENST00000549244 247 ntBASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 MIR4643-201ENST00000577473 78 ntBASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 AC060766.3-201ENST00000591442 263 ntBASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 U2.14-201ENST00000615943 113 ntBASIC4.78□□□□□ -1.64
RTCBQ9Y3I0 AL591424.2-201ENST00000617023 128 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms