Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 RNU6-48P-201ENST00000384161 107 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNU6-36P-201ENST00000384172 107 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNU6-4P-201ENST00000384205 107 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNU6-5P-201ENST00000384238 107 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNU6-3P-201ENST00000384314 107 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 SNORD116-1-201ENST00000384335 95 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNU6-517P-201ENST00000384362 110 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNU6-16P-201ENST00000384385 107 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNU6-15P-201ENST00000384534 107 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNU6-1127P-201ENST00000384580 107 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNU6-2-201ENST00000384627 107 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNU6-29P-201ENST00000384637 107 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNU6-9-201ENST00000384776 107 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNU6-33P-201ENST00000384793 107 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 MIR95-201ENST00000385072 81 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNA5SP270-201ENST00000411361 118 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 BTF3L4P1-201ENST00000413813 468 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.19□□□□□ -2.06
FOXA2Q9Y261 AC107083.1-201ENST00000439643 279 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 AL135938.1-201ENST00000443141 297 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.19□□□□□ -2.06
FOXA2Q9Y261 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.19□□□□□ -2.06
FOXA2Q9Y261 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.19□□□□□ -2.06
FOXA2Q9Y261 AC097462.2-201ENST00000504623 481 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
FOXA2Q9Y261 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.19□□□□□ -2.06
FOXA2Q9Y261 MTCYBP40-201ENST00000509390 1135 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 HIGD1AP13-201ENST00000509878 289 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 SNORA48.11-201ENST00000517015 89 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 AC118273.2-201ENST00000532092 465 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.19□□□□□ -2.06
FOXA2Q9Y261 AC008752.3-201ENST00000588113 712 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 AC078795.2-201ENST00000602835 1252 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 RNU6-6P-201ENST00000606623 107 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 AC009509.4-201ENST00000619202 509 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 AC005609.4-201ENST00000625071 447 ntBASIC2.19□□□□□ -2.06
FOXA2Q9Y261 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
FOXA2Q9Y261 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AL365361.1-201ENST00000566942 3481 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 RNU6-552P-201ENST00000362869 119 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 RNU6-529P-201ENST00000363383 104 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 RNU6-1245P-201ENST00000411130 106 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AIMP1P2-201ENST00000425294 312 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AL451074.3-201ENST00000437709 472 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AC016691.1-201ENST00000441321 413 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AC011753.1-201ENST00000451001 220 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AC008571.1-201ENST00000467232 300 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AL121594.1-201ENST00000475906 575 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 RNU6-377P-201ENST00000515965 102 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 RNU2-69P-201ENST00000516061 100 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 RN7SKP219-201ENST00000516825 296 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 CKS1BP7-201ENST00000522230 235 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AP005435.4-201ENST00000529514 284 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 CYCSP26-201ENST00000534107 320 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 LARP7P3-201ENST00000579888 337 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 MTATP6P3-201ENST00000581686 676 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 ELOCP29-201ENST00000588193 334 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AC004223.2-201ENST00000590309 544 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.18□□□□□ -2.06
FOXA2Q9Y261 Z82243.1-201ENST00000609432 473 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 MIR7106-201ENST00000612419 65 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AL161423.1-201ENST00000613700 262 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AC006386.2-201ENST00000624491 75 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AC012005.1-201ENST00000624575 75 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 AP003400.5-201ENST00000624827 617 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 U4.7-201ENST00000638126 106 ntBASIC2.18□□□□□ -2.06
FOXA2Q9Y261 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
FOXA2Q9Y261 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 Z82195.2-201ENST00000612348 18351 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 Y_RNA.1-201ENST00000352915 104 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 RNU6-996P-201ENST00000365438 107 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 SNORA18.3-201ENST00000384122 132 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 RNU6-1103P-201ENST00000384150 107 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 SNORA16.2-201ENST00000390991 127 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 Y_RNA.582-201ENST00000391023 95 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 RNU6-903P-201ENST00000391270 109 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 DEFB108C-201ENST00000400154 252 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 RPS4XP8-201ENST00000402039 771 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AL138827.1-201ENST00000402666 306 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 MTCYBP8-201ENST00000422855 651 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AC105272.1-201ENST00000438604 198 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 RPL39P29-201ENST00000447779 157 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 HMGB1P29-201ENST00000505659 499 ntBASIC2.17□□□□□ -2.06
FOXA2Q9Y261 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXA2Q9Y261 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms