Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AC092104.1-201ENST00000497346 1441 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 FARSBP1-201ENST00000435808 1778 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 RNU1-62P-201ENST00000362599 164 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 SNORD3E-201ENST00000362899 217 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 RNU6-395P-201ENST00000365662 106 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 RNU6-946P-201ENST00000383878 107 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 RNU6-546P-201ENST00000383991 107 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 RNU6-622P-201ENST00000384272 103 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 SNORD14D-201ENST00000384390 87 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 MIR150-201ENST00000385048 84 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AC009518.2-201ENST00000418056 731 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AL365338.1-201ENST00000422282 858 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AL358453.1-201ENST00000422522 250 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 UBE2V1P4-201ENST00000425374 344 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 MTCO3P5-201ENST00000433620 714 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AMD1P1-201ENST00000457220 922 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 RNA5SP57-201ENST00000459463 123 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AL121594.1-201ENST00000475906 575 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 PTP4A1P4-201ENST00000512479 322 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 Y_RNA.689-201ENST00000516589 107 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AP005597.4-201ENST00000526762 229 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AL391001.1-201ENST00000602747 715 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 BNIP3P31-201ENST00000604515 566 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AL158042.1-201ENST00000605338 460 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 uc_338.12-201ENST00000616344 181 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 AC241585.2-209ENST00000638217 143 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.07□□□□□ -2.24
HHLA3Q9XRX5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 RNU4-68P-201ENST00000364314 141 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 RNU6-60P-201ENST00000364792 103 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 RNU6-487P-201ENST00000365430 104 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 RNU6-757P-201ENST00000410334 100 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 Y_RNA.623-201ENST00000411128 95 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 FDX1P2-201ENST00000450769 375 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 HMGN2P23-201ENST00000456759 269 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 RPS29P23-201ENST00000458635 123 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 SNORD13-201ENST00000459299 104 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 HMGB1P30-201ENST00000492455 606 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 RNA5SP61-201ENST00000516453 100 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 RNU6-965P-201ENST00000516721 96 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 SNORA31.24-201ENST00000517232 57 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 CR383656.8-201ENST00000549046 145 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 MIR4307-201ENST00000582802 84 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 AC016925.2-201ENST00000605108 242 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 MIR7843-201ENST00000622274 79 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 MTND4P16-201ENST00000466108 1367 ntBASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HHLA3Q9XRX5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 RNU6-655P-201ENST00000362858 107 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 RNU4-92P-201ENST00000363783 136 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 RNU6-960P-201ENST00000364056 120 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 RNU6-190P-201ENST00000384154 102 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 RNU6-72P-201ENST00000384285 79 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 RPS20P2-201ENST00000402520 389 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 RNU2-62P-201ENST00000410868 191 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 CALM1P1-201ENST00000442082 433 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 SNRPGP13-201ENST00000442212 177 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 RPL23AP35-201ENST00000451906 501 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC134050.1-201ENST00000495088 933 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC117532.1-201ENST00000514638 323 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC107934.1-201ENST00000522215 217 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC022616.8-201ENST00000533569 253 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AL160236.1-201ENST00000556317 195 ntBASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.05□□□□□ -2.24
HHLA3Q9XRX5 AC174048.1-201ENST00000603389 144 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms