Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 MIR6758-201ENST00000620653 63 ntBASIC4.25□□□□□ -1.73
AP4E1Q9UPM8 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 RNA5SP502-201ENST00000362694 119 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 SNORD35B-201ENST00000363660 87 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 RNU6-704P-201ENST00000364162 103 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 RNU6-879P-201ENST00000364328 108 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 RNU6-843P-201ENST00000384454 104 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 MIR124-3-201ENST00000384866 87 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 MIR141-201ENST00000384975 95 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 RPL19P1-201ENST00000411635 428 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 RNU6-346P-201ENST00000516288 111 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 SNORA70.16-201ENST00000516390 95 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 RNA5SP291-201ENST00000517222 105 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 IGKV2-38-201ENST00000517443 247 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 MRPL49P2-201ENST00000521066 465 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 RN7SL600P-201ENST00000581811 299 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 SNRPGP15-201ENST00000600149 222 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 AC037487.3-201ENST00000606668 112 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 U6.106-201ENST00000636360 105 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 ZNF962P-201ENST00000443465 3140 ntBASIC4.24□□□□□ -1.73
AP4E1Q9UPM8 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.82-201ENST00000363000 102 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.92-201ENST00000363043 102 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.235-201ENST00000364412 102 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.306-201ENST00000365015 102 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.312-201ENST00000365089 102 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.322-201ENST00000365151 102 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 SNORD50.2-201ENST00000365465 70 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Z98749.2-208ENST00000381646 500 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.383-201ENST00000383855 97 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.569-201ENST00000384749 103 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 MIR32-201ENST00000384965 70 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 MIR613-201ENST00000385248 95 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 SNORD12B-201ENST00000410433 91 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 RNA5SP31-201ENST00000411144 127 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 RAB9AP3-201ENST00000412737 573 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 AC096638.1-201ENST00000444678 216 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 RAB9AP1-201ENST00000449393 573 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 snoU13.24-201ENST00000458998 104 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.650-201ENST00000459002 102 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 AC010618.1-201ENST00000469924 477 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 RPL23AP49-201ENST00000492925 468 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 BTF3L4P4-201ENST00000506381 449 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 AC091874.1-201ENST00000511402 339 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.662-201ENST00000516028 97 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 SNORA43.2-201ENST00000516652 128 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.777-201ENST00000516982 102 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 AC090281.1-201ENST00000523019 276 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 CYCSP39-201ENST00000565821 309 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 AC025627.2-201ENST00000576220 160 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 MIR548AI-201ENST00000579940 88 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.771-201ENST00000598668 102 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 AC004832.4-201ENST00000608952 331 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.789-201ENST00000622480 102 ntBASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
AP4E1Q9UPM8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 UBE2WP1-201ENST00000362030 340 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 SNORA60-201ENST00000362396 134 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 SNORD74.4-201ENST00000364129 80 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.240-201ENST00000364469 95 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 MIR153-2-201ENST00000385225 87 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 RNU6-918P-201ENST00000391219 106 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 Y_RNA.590-201ENST00000410140 107 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 RNA5SP104-201ENST00000410989 118 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 RNU2-61P-201ENST00000411069 191 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 HSPE1P12-201ENST00000412576 301 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 SNRPEP9-201ENST00000436794 238 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AL031659.1-201ENST00000447075 539 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AC087477.1-201ENST00000465747 340 ntBASIC4.22□□□□□ -1.73
AP4E1Q9UPM8 AC091021.1-201ENST00000468051 388 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms