Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AL137100.2-201ENST00000555786 315 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 AC006557.5-201ENST00000603126 811 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 AL390123.1-201ENST00000603216 237 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 AC006077.1-201ENST00000604746 343 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 MIR6075-201ENST00000620782 95 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 AC112200.1-201ENST00000625015 234 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 U6.104-201ENST00000637979 90 ntBASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PACSIN3Q9UKS6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 Y_RNA.150-201ENST00000363562 102 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 MTHFD2P2-201ENST00000407725 247 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 AC244098.2-201ENST00000422068 99 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 AL591419.1-201ENST00000427423 339 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 RPL26P6-201ENST00000440913 438 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 PRELID3BP1-201ENST00000457142 540 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 HMGN1P11-201ENST00000508668 303 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 Vault.1-201ENST00000516474 102 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 RNU6-182P-201ENST00000516970 105 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 RNA5SP471-201ENST00000516971 106 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 AC026333.2-201ENST00000542164 106 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 MIR4444-1-201ENST00000581696 74 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 MIR4444-2-201ENST00000584390 74 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 RPS29P30-201ENST00000600975 111 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 AL121772.2-201ENST00000614331 297 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 AP001282.2-201ENST00000616149 309 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 AC012442.3-202ENST00000636742 206 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 AP000553.6-201ENST00000641242 118 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 AP000560.1-201ENST00000624150 1937 ntBASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PACSIN3Q9UKS6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 UBE2L2-201ENST00000254302 429 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 RPL9P7-201ENST00000330965 580 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 RNA5SP124-201ENST00000362739 110 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 Y_RNA.84-201ENST00000363011 104 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 RNU6-774P-201ENST00000363238 107 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 RNU6-512P-201ENST00000364438 103 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 Y_RNA.416-201ENST00000384014 113 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 SNORA36C-201ENST00000384289 132 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 Y_RNA.478-201ENST00000384358 107 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 RNU6-933P-201ENST00000384424 107 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 Y_RNA.526-201ENST00000384572 110 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 MIR449B-201ENST00000384995 97 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 RNA5SP171-201ENST00000391071 115 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 SAR1AP2-201ENST00000392696 594 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 RNU2-25P-201ENST00000411041 191 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 EI24P1-201ENST00000416584 867 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 AL159987.2-201ENST00000432754 307 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 GOT2P5-201ENST00000433995 546 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 AC092573.2-201ENST00000434546 243 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 USP9YP7-201ENST00000436723 430 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 AL513043.1-201ENST00000439124 535 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 RPEP5-201ENST00000441137 268 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 HMGN2P21-201ENST00000447764 270 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 USP9YP32-201ENST00000452432 430 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 AL139109.1-201ENST00000455491 297 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 RPL9P9-202ENST00000466501 579 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 AC034236.1-201ENST00000469891 373 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 AC008716.1-201ENST00000511084 513 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 APOOP4-201ENST00000513530 597 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 AC034114.1-201ENST00000520293 285 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 AC130289.1-201ENST00000577321 73 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 MIR5701-3-201ENST00000578890 82 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 MIR5701-1-201ENST00000585138 82 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 MIR5701-2-201ENST00000615634 82 ntBASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PACSIN3Q9UKS6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
PACSIN3Q9UKS6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PACSIN3Q9UKS6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms