Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AP1S2P1-201ENST00000457344 379 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.18□□□□□ -2.38
SCN11AQ9UI33 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 SNORA77B-201ENST00000578179 125 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 AC018618.2-201ENST00000604770 446 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 AC090578.1-201ENST00000604955 591 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 AC073968.1-201ENST00000618594 637 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 ZNF663P-202ENST00000641770 1131 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 RNU6-1237P-201ENST00000384777 107 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 EIF1P1-201ENST00000421436 341 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 RPEP5-201ENST00000441137 268 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 GAPDHP17-201ENST00000449858 1001 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
SCN11AQ9UI33 AC010409.1-201ENST00000487382 476 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.17□□□□□ -2.38
SCN11AQ9UI33 RNA5SP134-201ENST00000516492 96 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.17□□□□□ -2.38
SCN11AQ9UI33 AC009509.4-201ENST00000619202 509 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 SNORD114-24-201ENST00000365029 72 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 SNORA25B-201ENST00000365507 128 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 AL512637.2-201ENST00000431287 1256 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 snoU13.19-201ENST00000459148 104 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.17□□□□□ -2.38
SCN11AQ9UI33 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.17□□□□□ -2.38
SCN11AQ9UI33 HSPA8P13-201ENST00000523715 472 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 AC087897.1-201ENST00000550134 156 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.17□□□□□ -2.38
SCN11AQ9UI33 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.17□□□□□ -2.38
SCN11AQ9UI33 AC090079.2-201ENST00000575289 768 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 BNIP3P23-201ENST00000599655 511 ntBASIC0.17□□□□□ -2.38
SCN11AQ9UI33 AC245060.5-201ENST00000610778 3293 ntBASIC0.16□□□□□ -2.38
SCN11AQ9UI33 RNU6-98P-201ENST00000384173 107 ntBASIC0.16□□□□□ -2.38
SCN11AQ9UI33 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.16□□□□□ -2.38
SCN11AQ9UI33 BEND7P1-201ENST00000422058 457 ntBASIC0.16□□□□□ -2.38
SCN11AQ9UI33 AC139712.2-201ENST00000424302 339 ntBASIC0.16□□□□□ -2.38
SCN11AQ9UI33 HSPE1P9-201ENST00000440046 311 ntBASIC0.16□□□□□ -2.38
SCN11AQ9UI33 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.16□□□□□ -2.38
SCN11AQ9UI33 AC124947.2-202ENST00000552735 133 ntBASIC0.16□□□□□ -2.38
SCN11AQ9UI33 AC136619.2-201ENST00000563361 631 ntBASIC0.16□□□□□ -2.38
SCN11AQ9UI33 AC093913.1-201ENST00000614178 329 ntBASIC0.16□□□□□ -2.38
SCN11AQ9UI33 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
SCN11AQ9UI33 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
SCN11AQ9UI33 RPL36AP53-201ENST00000432891 316 ntBASIC0.15□□□□□ -2.39
SCN11AQ9UI33 AL512844.2-201ENST00000433990 593 ntBASIC0.15□□□□□ -2.39
SCN11AQ9UI33 CYCTP-201ENST00000504253 315 ntBASIC0.15□□□□□ -2.39
SCN11AQ9UI33 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.15□□□□□ -2.39
SCN11AQ9UI33 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
SCN11AQ9UI33 AC009268.1-201ENST00000561352 1203 ntBASIC0.15□□□□□ -2.39
SCN11AQ9UI33 AP005229.2-201ENST00000609980 697 ntBASIC0.15□□□□□ -2.39
SCN11AQ9UI33 MTND4P14-201ENST00000435799 1354 ntBASIC0.14□□□□□ -2.39
SCN11AQ9UI33 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.14□□□□□ -2.39
SCN11AQ9UI33 Y_RNA.170-201ENST00000363746 110 ntBASIC0.14□□□□□ -2.39
SCN11AQ9UI33 SNORD95.1-201ENST00000364099 68 ntBASIC0.14□□□□□ -2.39
SCN11AQ9UI33 Y_RNA.255-201ENST00000364581 97 ntBASIC0.14□□□□□ -2.39
SCN11AQ9UI33 AL161935.2-201ENST00000414627 60 ntBASIC0.14□□□□□ -2.39
SCN11AQ9UI33 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.14□□□□□ -2.39
SCN11AQ9UI33 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.14□□□□□ -2.39
SCN11AQ9UI33 AL353691.1-201ENST00000451332 387 ntBASIC0.14□□□□□ -2.39
SCN11AQ9UI33 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.14□□□□□ -2.39
SCN11AQ9UI33 RNU6-1256P-201ENST00000516539 103 ntBASIC0.14□□□□□ -2.39
SCN11AQ9UI33 COPS8P3-201ENST00000526024 482 ntBASIC0.14□□□□□ -2.39
SCN11AQ9UI33 AC005261.5-201ENST00000596280 355 ntBASIC0.14□□□□□ -2.39
SCN11AQ9UI33 Z75746.1-201ENST00000440243 2080 ntBASIC0.13□□□□□ -2.39
SCN11AQ9UI33 RNU6-140P-201ENST00000384566 108 ntBASIC0.13□□□□□ -2.39
SCN11AQ9UI33 AL355615.1-201ENST00000406187 641 ntBASIC0.13□□□□□ -2.39
SCN11AQ9UI33 AC092423.1-201ENST00000430165 186 ntBASIC0.13□□□□□ -2.39
SCN11AQ9UI33 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.13□□□□□ -2.39
SCN11AQ9UI33 VPS26AP1-201ENST00000483197 979 ntBASIC0.13□□□□□ -2.39
SCN11AQ9UI33 SNORA14.1-201ENST00000516113 141 ntBASIC0.13□□□□□ -2.39
SCN11AQ9UI33 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.13□□□□□ -2.39
SCN11AQ9UI33 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.13□□□□□ -2.39
SCN11AQ9UI33 AP001180.6-201ENST00000584918 159 ntBASIC0.13□□□□□ -2.39
SCN11AQ9UI33 AC123767.1-202ENST00000620407 817 ntBASIC0.13□□□□□ -2.39
SCN11AQ9UI33 GDI2P1-201ENST00000429312 1336 ntBASIC0.12□□□□□ -2.39
SCN11AQ9UI33 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
SCN11AQ9UI33 AC090625.1-201ENST00000357130 210 ntBASIC0.12□□□□□ -2.39
SCN11AQ9UI33 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.12□□□□□ -2.39
SCN11AQ9UI33 MIR605-201ENST00000385078 83 ntBASIC0.12□□□□□ -2.39
SCN11AQ9UI33 RNU2-47P-201ENST00000410649 186 ntBASIC0.12□□□□□ -2.39
SCN11AQ9UI33 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.12□□□□□ -2.39
SCN11AQ9UI33 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.12□□□□□ -2.39
SCN11AQ9UI33 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.12□□□□□ -2.39
SCN11AQ9UI33 AL441985.1-201ENST00000457727 251 ntBASIC0.12□□□□□ -2.39
SCN11AQ9UI33 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.12□□□□□ -2.39
SCN11AQ9UI33 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.12□□□□□ -2.39
SCN11AQ9UI33 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.12□□□□□ -2.39
SCN11AQ9UI33 RNU4-12P-201ENST00000365233 139 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 RNU2-7P-201ENST00000410794 178 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.11□□□□□ -2.39
SCN11AQ9UI33 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.11□□□□□ -2.39
SCN11AQ9UI33 AL590383.1-201ENST00000428602 75 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.11□□□□□ -2.39
SCN11AQ9UI33 CR383656.7-201ENST00000548164 174 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 TRAV32-201ENST00000553993 340 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 AC108676.2-201ENST00000605225 163 ntBASIC0.11□□□□□ -2.39
SCN11AQ9UI33 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.11□□□□□ -2.39
SCN11AQ9UI33 FARSBP1-201ENST00000435808 1778 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms