Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SNORA31.21-201ENST00000517180 77 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 RNA5SP454-201ENST00000517231 127 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 AC105029.1-201ENST00000520250 669 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 AP004607.1-201ENST00000524456 203 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.39□□□□□ -1.87
COL20A1Q9P218 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.39□□□□□ -1.87
COL20A1Q9P218 AC138761.3-201ENST00000579993 334 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 HMGN2P15-201ENST00000585707 270 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.39□□□□□ -1.87
COL20A1Q9P218 AL117336.2-201ENST00000602435 335 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.39□□□□□ -1.87
COL20A1Q9P218 AC009233.1-201ENST00000616477 371 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 SCARNA15.3-201ENST00000626315 122 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 SCARNA4.1-201ENST00000628597 123 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 U6.98-201ENST00000637157 84 ntBASIC3.39□□□□□ -1.87
COL20A1Q9P218 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
COL20A1Q9P218 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.39□□□□□ -1.87
COL20A1Q9P218 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL20A1Q9P218 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL20A1Q9P218 AC138393.1-203ENST00000327086 343 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-37P-201ENST00000362692 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 Y_RNA.135-201ENST00000363439 95 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-11P-201ENST00000364234 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-7-201ENST00000364784 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-8-201ENST00000365467 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-898P-201ENST00000365627 104 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-25P-201ENST00000383873 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-1-201ENST00000383898 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-48P-201ENST00000384161 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-36P-201ENST00000384172 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-4P-201ENST00000384205 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-5P-201ENST00000384238 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-3P-201ENST00000384314 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-16P-201ENST00000384385 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-15P-201ENST00000384534 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-2-201ENST00000384627 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-29P-201ENST00000384637 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-9-201ENST00000384776 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-33P-201ENST00000384793 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 AC245291.1-201ENST00000419501 328 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 ARF4P2-201ENST00000430209 526 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 HMGN2P10-201ENST00000448085 265 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 AC107399.1-201ENST00000451226 265 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 NIPA2P5-201ENST00000452282 464 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 AL031183.1-201ENST00000457667 207 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RN7SL442P-201ENST00000473804 320 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 AC096745.1-201ENST00000509945 370 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RN7SKP132-201ENST00000516001 208 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 Y_RNA.687-201ENST00000516558 91 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 SNORA64.4-201ENST00000516632 81 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RAB11AP2-201ENST00000545905 639 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 MIR4790-201ENST00000577799 79 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 C8orf59P2-201ENST00000603441 271 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 RNU6-6P-201ENST00000606623 107 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 MIR7106-201ENST00000612419 65 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 AL133216.2-202ENST00000634512 349 ntBASIC3.38□□□□□ -1.87
COL20A1Q9P218 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL20A1Q9P218 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
COL20A1Q9P218 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL20A1Q9P218 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
COL20A1Q9P218 AL035425.3-201ENST00000564206 4996 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
COL20A1Q9P218 Y_RNA.184-201ENST00000363884 108 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 RNU5E-7P-201ENST00000365290 117 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 AC074085.1-201ENST00000413598 418 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 AC016831.2-201ENST00000417179 352 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.37□□□□□ -1.87
COL20A1Q9P218 MTND3P23-201ENST00000431980 347 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.37□□□□□ -1.87
COL20A1Q9P218 AC125238.1-201ENST00000448842 249 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 snoU109.2-201ENST00000459316 135 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 AC104472.2-201ENST00000469035 601 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 AC091826.1-201ENST00000514065 313 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.37□□□□□ -1.87
COL20A1Q9P218 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.37□□□□□ -1.87
COL20A1Q9P218 COPS8P3-201ENST00000526024 482 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL20A1Q9P218 AC021739.1-201ENST00000559631 174 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 RPS3AP23-202ENST00000574601 686 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.37□□□□□ -1.87
COL20A1Q9P218 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL20A1Q9P218 ZNF519P1-201ENST00000449011 1626 ntBASIC3.37□□□□□ -1.87
COL20A1Q9P218 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
COL20A1Q9P218 CDC27P3-201ENST00000635418 1910 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 AP003122.5-201ENST00000527668 3766 ntBASIC3.36□□□□□ -1.87
COL20A1Q9P218 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms