Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 MTCO3P7-201ENST00000510008 774 ntBASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 SNORA25.11-201ENST00000515935 105 ntBASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 AP005902.1-201ENST00000521358 186 ntBASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 AL137161.1-201ENST00000532231 390 ntBASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 BNIP3P6-201ENST00000549284 499 ntBASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 MIR5092-201ENST00000583139 88 ntBASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 MIR4658-201ENST00000584344 65 ntBASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 AC008121.3-201ENST00000618726 433 ntBASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 Z69720.2-201ENST00000624755 279 ntBASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
BLOC1S4Q9NUP1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 RNU6-552P-201ENST00000362869 119 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 SNORA5B-201ENST00000363786 132 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 RNU6-996P-201ENST00000365438 107 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 RNU6-622P-201ENST00000384272 103 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 RNU6-1127P-201ENST00000384580 107 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 MIR518C-201ENST00000384822 101 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 SNORD70.1-201ENST00000391007 85 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 BTF3P7-201ENST00000407097 488 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 CYCSP33-201ENST00000414485 327 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 MTCO2P19-201ENST00000427513 598 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 PRPS1P1-201ENST00000445305 876 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 TPT1P7-201ENST00000458300 517 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 SCARNA18-201ENST00000459004 134 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 AC073901.1-201ENST00000462471 408 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 RPL23AP49-201ENST00000492925 468 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 AF213884.2-201ENST00000510417 903 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 AC109479.2-201ENST00000517842 174 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 MTCYBP33-201ENST00000575007 1130 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 AL391646.1-201ENST00000603860 190 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 AL138963.2-201ENST00000605137 226 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 uc_338.15-201ENST00000615470 191 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 AC007792.1-201ENST00000623023 402 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 AP003400.5-201ENST00000624827 617 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.81□□□□□ -1.96
BLOC1S4Q9NUP1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 RNU6-78P-201ENST00000362897 107 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 RNA5SP125-201ENST00000364843 120 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 Y_RNA.399-201ENST00000383955 105 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 Y_RNA.481-201ENST00000384373 102 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 MIR27B-201ENST00000385129 97 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 RNU6-903P-201ENST00000391270 109 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 AL591043.1-201ENST00000432461 424 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 AL451074.3-201ENST00000437709 472 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 AC027673.1-201ENST00000456245 405 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 RNU4-29P-201ENST00000515943 174 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 SNORA31.23-201ENST00000517219 133 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 AC069113.1-201ENST00000517763 267 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 AP005435.4-201ENST00000529514 284 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 AC090897.2-201ENST00000581715 130 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 AC008752.3-201ENST00000588113 712 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 RPL12P50-201ENST00000603116 116 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 AC097065.2-201ENST00000608159 533 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 AC002543.1-201ENST00000299783 1954 ntBASIC2.8□□□□□ -1.96
BLOC1S4Q9NUP1 RNU6-529P-201ENST00000363383 104 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 AC007064.1-201ENST00000412238 351 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 RPL39P40-201ENST00000445481 146 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 RPS27AP9-201ENST00000477681 438 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 AL163973.1-201ENST00000484753 577 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 AC140059.1-201ENST00000489238 361 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 RPS27P27-201ENST00000498779 255 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 MTND3P5-201ENST00000512798 333 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 RNU2-69P-201ENST00000516061 100 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 RNU1-104P-201ENST00000517280 175 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 AC090136.1-201ENST00000520009 240 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 MTCO3P23-201ENST00000561363 289 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 AC009063.1-201ENST00000563342 702 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 MTATP6P3-201ENST00000581686 676 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 AC017083.3-201ENST00000609955 700 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 AC104073.3-201ENST00000610942 955 ntBASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
BLOC1S4Q9NUP1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms