Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 MTCO2P34-201ENST00000421994 607 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AL365400.1-201ENST00000431854 640 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 MTCO2P16-201ENST00000436962 677 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AC090255.1-201ENST00000495779 349 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AF213884.2-201ENST00000510417 903 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AC117532.1-201ENST00000514638 323 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 RNU1-104P-201ENST00000517280 175 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 MIR5194-201ENST00000582634 120 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AL161756.2-201ENST00000604597 246 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AL138963.2-201ENST00000605137 226 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AL121917.1-203ENST00000605534 577 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AC093788.1-201ENST00000609356 927 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AC091834.1-201ENST00000614543 472 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AC009233.1-201ENST00000616477 371 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AC090582.1-201ENST00000636321 199 ntBASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.8□□□□□ -2.12
CCL28Q9NRJ3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 RNU6-1010P-201ENST00000362757 107 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 SNORD116-9-201ENST00000384000 95 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 RNU1-52P-201ENST00000384190 164 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 RNU6-622P-201ENST00000384272 103 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 SNORD116-3-201ENST00000384287 95 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 SNORD116-7-201ENST00000384404 95 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 SNORD116-5-201ENST00000384462 95 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 SNORD116-20-201ENST00000384529 92 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 RNU2-3P-201ENST00000410144 191 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 RNU2-9P-201ENST00000410194 145 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 RNU2-63P-201ENST00000410792 194 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 AC096664.2-201ENST00000411843 406 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 AC007064.1-201ENST00000412238 351 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 EIF4EP4-201ENST00000424916 578 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 AL669831.1-202ENST00000428504 417 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 SUMO1P4-201ENST00000429430 302 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 GTF2IP13-201ENST00000438487 386 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 AL360221.1-201ENST00000445989 335 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 MTND1P18-201ENST00000448191 573 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 GMFBP1-201ENST00000467831 427 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 RN7SKP298-201ENST00000515950 94 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 RNA5SP281-201ENST00000516504 135 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 SNORA43.2-201ENST00000516652 128 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 RNU6-1178P-201ENST00000516674 107 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 CBX3P7-201ENST00000532876 502 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 PSMA3P-201ENST00000555485 635 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 MIR5002-201ENST00000584713 97 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 AC010620.1-201ENST00000601088 1102 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 AC073648.5-201ENST00000603502 305 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 AC025449.1-201ENST00000603896 529 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 U4atac.1-201ENST00000618345 95 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 AC009509.4-201ENST00000619202 509 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 AC136475.10-201ENST00000620253 385 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 CTSLP2-204ENST00000629029 392 ntBASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.79□□□□□ -2.12
CCL28Q9NRJ3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 RNU6-1120P-201ENST00000362988 108 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 SNORA5B-201ENST00000363786 132 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 RNA5SP37-201ENST00000365420 130 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 RNU1-57P-201ENST00000384491 166 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 RNU6-1140P-201ENST00000410517 106 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 OR9R1P-201ENST00000412200 877 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 CYCSP33-201ENST00000414485 327 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 CDK8P2-201ENST00000415020 547 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 MTATP6P18-201ENST00000417994 673 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC138623.1-201ENST00000418060 216 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC006946.1-201ENST00000429106 328 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 HMGB1P31-201ENST00000437242 427 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 RPL23AP7-203ENST00000449021 469 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AL021397.1-201ENST00000451806 248 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 RNU6-717P-201ENST00000459076 104 ntBASIC1.78□□□□□ -2.12
CCL28Q9NRJ3 AC090515.1-201ENST00000465295 476 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms