Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC004552.1-201ENST00000419089 348 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 AL356867.1-201ENST00000429623 299 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 FCF1P4-201ENST00000448326 183 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 RBMY2UP-201ENST00000453474 324 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 RPS26P3-201ENST00000470205 348 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 AC090543.2-201ENST00000483963 348 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 AC004057.1-201ENST00000485827 348 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 RNU1-61P-201ENST00000516107 151 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 AC084851.1-201ENST00000529105 249 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 HMGB1P14-201ENST00000557424 591 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 AC009314.1-201ENST00000603871 304 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 AC096772.1-201ENST00000609146 564 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 U6.104-201ENST00000637979 90 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 AC018555.1-201ENST00000567548 1980 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 NEAT1-202ENST00000501122 22743 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 RNU6-827P-201ENST00000365553 106 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 SNORA48.5-201ENST00000391143 135 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 SAR1AP2-201ENST00000392696 594 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 SNORD56-201ENST00000413522 71 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 AC007098.1-201ENST00000420122 367 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 AC017083.1-201ENST00000428093 483 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 UBE2DNL-203ENST00000474922 222 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 RNU2-27P-201ENST00000516185 142 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 AC007375.1-201ENST00000554513 578 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 AMZ2P1-203ENST00000565833 850 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 RPS29P30-201ENST00000600975 111 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 AL390123.1-201ENST00000603216 237 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 AC006077.1-201ENST00000604746 343 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 AL365434.2-201ENST00000607979 234 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 AC012531.5-201ENST00000611375 151 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 AC141273.2-201ENST00000618989 130 ntBASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PDLIM7Q9NR12 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
PDLIM7Q9NR12 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.09□□□□□ -1.76
PDLIM7Q9NR12 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 MIR412-201ENST00000362142 91 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 RNU6-595P-201ENST00000363944 107 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 SNORA20.1-201ENST00000364790 130 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 RNU6-209P-201ENST00000384118 107 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 MIR628-201ENST00000385229 95 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 U3.26-201ENST00000391236 204 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 RNU2-64P-201ENST00000411315 191 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 MTCO3P19-201ENST00000415864 321 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 AL590383.1-201ENST00000428602 75 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 NDUFB1P1-201ENST00000435191 180 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 MTND5P9-201ENST00000503854 1755 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 BTF3L4P4-201ENST00000506381 449 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 RNU6-1023P-201ENST00000516137 106 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 RNU6-570P-201ENST00000517051 105 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 AC008011.1-201ENST00000545989 227 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 MIR5701-3-201ENST00000578890 82 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 MIR5701-1-201ENST00000585138 82 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 MIR5701-2-201ENST00000615634 82 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 AC130454.1-201ENST00000622948 401 ntBASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PDLIM7Q9NR12 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 Y_RNA.471-201ENST00000384312 102 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 SNORA69.1-201ENST00000390904 137 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 RNU6-700P-201ENST00000391043 107 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 EIF4EP2-201ENST00000422816 654 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 MYL8P-204ENST00000431574 518 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 MTND2P29-201ENST00000438595 412 ntBASIC4.07□□□□□ -1.76
PDLIM7Q9NR12 HMGN2P16-201ENST00000456802 261 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms