Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC104333.2-201ENST00000422630 192 ntBASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 RNU6-1061P-201ENST00000516530 99 ntBASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 RNU2-60P-201ENST00000517290 128 ntBASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 AC068870.2-201ENST00000620635 389 ntBASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PRDM9Q9NQV7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 ADAM5-202ENST00000399789 1942 ntBASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 SNORD45.3-201ENST00000363836 72 ntBASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 SNORA74A-201ENST00000364089 198 ntBASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 AL645927.1-201ENST00000396783 406 ntBASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 Y_RNA.630-201ENST00000411370 108 ntBASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 AC000111.2-201ENST00000448200 210 ntBASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 RN7SL244P-201ENST00000493405 297 ntBASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 RNA5SP154-201ENST00000516193 111 ntBASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 AL021997.2-201ENST00000615674 271 ntBASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 AL023881.1-201ENST00000621088 301 ntBASIC4.78□□□□□ -1.64
PRDM9Q9NQV7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
PRDM9Q9NQV7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 AC139713.2-214ENST00000642059 1811 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 MIR450A1-201ENST00000362262 91 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 Y_RNA.114-201ENST00000363265 113 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 RNA5SP455-201ENST00000365190 119 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 PTMAP5-201ENST00000393073 333 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 EI24P2-201ENST00000397776 1076 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 RN7SKP16-201ENST00000410180 299 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 RNY4P30-201ENST00000410216 95 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 AL691449.1-201ENST00000426570 421 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 AC006028.1-201ENST00000438379 402 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 AL353748.1-201ENST00000440753 474 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 RN7SL517P-201ENST00000462240 305 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 RN7SL329P-201ENST00000467740 299 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 RN7SL808P-201ENST00000496066 299 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 COX6B1P5-201ENST00000509843 249 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 AC025754.2-201ENST00000606491 432 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 AL121890.5-201ENST00000620848 304 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 CR381572.2-201ENST00000624852 397 ntBASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PRDM9Q9NQV7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 U8.1-201ENST00000362843 134 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 RNU6-647P-201ENST00000364243 107 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 RNU6-1197P-201ENST00000391183 107 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 SNORA77-201ENST00000408716 125 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 Y_RNA.617-201ENST00000410920 90 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 BX510359.2-201ENST00000417920 305 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 AL365496.1-201ENST00000426885 215 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 AL450023.3-201ENST00000440592 271 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 AC112498.1-201ENST00000444401 332 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 Z75741.1-201ENST00000446793 314 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 RN7SL97P-201ENST00000486780 299 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 MIR3923-201ENST00000579521 83 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 AC091178.2-201ENST00000584401 117 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 AL451007.1-201ENST00000595491 289 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 ARF4P1-201ENST00000605447 541 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 AC015813.4-201ENST00000610469 179 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 MAPK10-304ENST00000641341 3984 ntBASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
PRDM9Q9NQV7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRDM9Q9NQV7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PRDM9Q9NQV7 SNORA12.1-201ENST00000390873 148 ntBASIC4.75□□□□□ -1.65
PRDM9Q9NQV7 CBX3P9-201ENST00000402326 552 ntBASIC4.75□□□□□ -1.65
PRDM9Q9NQV7 AL512604.1-201ENST00000404812 257 ntBASIC4.75□□□□□ -1.65
PRDM9Q9NQV7 TOMM22P1-201ENST00000418578 312 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms