Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 RPL7P54-201ENST00000438336 674 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 UBE2D3P4-201ENST00000441973 436 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 AC010486.2-201ENST00000505572 483 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 AC091965.2-201ENST00000512324 613 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 SNORA31.19-201ENST00000517079 126 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 AC009902.1-201ENST00000519351 183 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 AC034114.1-201ENST00000520293 285 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 FAM92A1P1-201ENST00000528023 890 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 OR5AL2P-201ENST00000532185 920 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 AC012065.4-201ENST00000602445 679 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 AL713866.2-201ENST00000603579 219 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 AC022202.1-201ENST00000613515 211 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.03□□□□□ -2.08
TM9SF3Q9HD45 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.03□□□□□ -2.09
TM9SF3Q9HD45 RNU5E-6P-201ENST00000365574 115 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 MIR583-201ENST00000384846 75 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 AC138623.1-201ENST00000418060 216 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 CYCSP49-201ENST00000420810 319 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 RPL23AP7-203ENST00000449021 469 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 USP9YP12-201ENST00000450481 570 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 AC003071.1-201ENST00000451219 789 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 AL021397.1-201ENST00000451806 248 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 RPL30P6-201ENST00000475925 342 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 AC010587.1-201ENST00000505809 469 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 SNRPGP17-201ENST00000603780 214 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 AC122133.1-201ENST00000613964 233 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 AC092140.2-201ENST00000618027 521 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 AC098657.3-201ENST00000620434 263 ntBASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TM9SF3Q9HD45 SNORA4.3-201ENST00000365564 137 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 RNU6-946P-201ENST00000383878 107 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 SNORD115.1-201ENST00000391109 76 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AL031577.2-201ENST00000404133 280 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 RNA5SP450-201ENST00000411206 102 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 RNU6-195P-201ENST00000411352 109 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AL137159.1-201ENST00000452808 512 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 snoU109.1-201ENST00000459339 135 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 RNU6-677P-201ENST00000516914 101 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 RNU6-1092P-201ENST00000516955 87 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 OR5B19P-201ENST00000531766 928 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 MTND3P12-201ENST00000559068 328 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AC233702.2-202ENST00000562547 291 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AC022893.3-201ENST00000607665 437 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AL773524.1-201ENST00000614065 229 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AC009487.4-201ENST00000624969 3585 ntBASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.01□□□□□ -2.09
TM9SF3Q9HD45 RNU6-858P-201ENST00000362436 107 ntBASIC2□□□□□ -2.09
TM9SF3Q9HD45 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2□□□□□ -2.09
TM9SF3Q9HD45 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2□□□□□ -2.09
TM9SF3Q9HD45 MIR518A2-201ENST00000384966 87 ntBASIC2□□□□□ -2.09
TM9SF3Q9HD45 AC114491.1-201ENST00000416095 246 ntBASIC2□□□□□ -2.09
TM9SF3Q9HD45 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2□□□□□ -2.09
TM9SF3Q9HD45 AL591704.1-201ENST00000432574 275 ntBASIC2□□□□□ -2.09
TM9SF3Q9HD45 MTND1P26-201ENST00000440488 538 ntBASIC2□□□□□ -2.09
TM9SF3Q9HD45 MTND1P30-201ENST00000441241 901 ntBASIC2□□□□□ -2.09
TM9SF3Q9HD45 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2□□□□□ -2.09
TM9SF3Q9HD45 ZNF736P5Y-201ENST00000451173 805 ntBASIC2□□□□□ -2.09
TM9SF3Q9HD45 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2□□□□□ -2.09
TM9SF3Q9HD45 AC093899.1-201ENST00000457984 376 ntBASIC2□□□□□ -2.09
TM9SF3Q9HD45 RAP1BP2-201ENST00000478270 544 ntBASIC2□□□□□ -2.09
TM9SF3Q9HD45 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2□□□□□ -2.09
TM9SF3Q9HD45 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2□□□□□ -2.09
TM9SF3Q9HD45 NDUFA5P6-201ENST00000542110 379 ntBASIC2□□□□□ -2.09
TM9SF3Q9HD45 OR11H5P-201ENST00000554039 926 ntBASIC2□□□□□ -2.09
TM9SF3Q9HD45 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms