Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 AC017083.1-201ENST00000428093 483 ntBASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 RPEP5-201ENST00000441137 268 ntBASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 U8.21-201ENST00000459536 136 ntBASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 ATP5F1P5-201ENST00000526403 760 ntBASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 AP003733.2-201ENST00000529409 171 ntBASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 AC022080.3-201ENST00000544433 482 ntBASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 SDR42E1P4-201ENST00000620894 481 ntBASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 AL360181.4-201ENST00000621752 134 ntBASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 MTND5P9-201ENST00000503854 1755 ntBASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BCAS3Q9H6U6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 FAM35DP-201ENST00000323387 2712 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 AP000560.1-201ENST00000624150 1937 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 MIR335-201ENST00000362173 94 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 RNU1-76P-201ENST00000362903 159 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 RNU6-700P-201ENST00000391043 107 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 RPL23AP48-201ENST00000406913 488 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 RN7SKP53-201ENST00000411337 315 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 Z85995.1-201ENST00000415547 335 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 HIGD1AP2-201ENST00000446367 280 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 TRBVB-201ENST00000477100 408 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 RN7SKP83-201ENST00000516512 178 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 RN7SKP209-201ENST00000516888 304 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 AC109479.2-201ENST00000517842 174 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 AC009314.1-201ENST00000603871 304 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 MIR1244-1-201ENST00000612829 85 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 AC006065.5-201ENST00000623427 349 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 SCARNA15.3-201ENST00000626315 122 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 SCARNA4.1-201ENST00000628597 123 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 MIR1244-3-201ENST00000635744 85 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 MIR1244-2-201ENST00000636449 85 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 MIR1244-4-202ENST00000636813 85 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 AL049781.1-201ENST00000623195 3585 ntBASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BCAS3Q9H6U6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 MTND5P6-201ENST00000422338 1798 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 RNU1-33P-201ENST00000364249 162 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 SNORD14B-201ENST00000364533 90 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 Y_RNA.416-201ENST00000384014 113 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 Y_RNA.471-201ENST00000384312 102 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 MIR548H3-201ENST00000408771 118 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 RNU6-1025P-201ENST00000410629 104 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 NDUFB4P7-201ENST00000423198 363 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 RPS23P5-201ENST00000495419 428 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 HMGB3P17-201ENST00000504195 649 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 AC026784.1-201ENST00000507986 352 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 IGKV2-26-201ENST00000518305 343 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 AC090281.1-201ENST00000523019 276 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 MIR3921-201ENST00000577308 85 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 KLKP1-201ENST00000595979 403 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 AC009318.2-201ENST00000610917 651 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 AC004852.3-201ENST00000614131 326 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
BCAS3Q9H6U6 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.96□□□□□ -1.77
BCAS3Q9H6U6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.96□□□□□ -1.77
BCAS3Q9H6U6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
BCAS3Q9H6U6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
BCAS3Q9H6U6 Y_RNA.27-201ENST00000362540 103 ntBASIC3.96□□□□□ -1.78
BCAS3Q9H6U6 RNU6-212P-201ENST00000362642 104 ntBASIC3.96□□□□□ -1.78
BCAS3Q9H6U6 RNU6-173P-201ENST00000364215 104 ntBASIC3.96□□□□□ -1.78
BCAS3Q9H6U6 RNY1-201ENST00000364228 113 ntBASIC3.96□□□□□ -1.78
BCAS3Q9H6U6 Y_RNA.555-201ENST00000384673 110 ntBASIC3.96□□□□□ -1.78
BCAS3Q9H6U6 RNU6-121P-201ENST00000410525 99 ntBASIC3.96□□□□□ -1.78
BCAS3Q9H6U6 RNU6-130P-201ENST00000411112 103 ntBASIC3.96□□□□□ -1.78
BCAS3Q9H6U6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.96□□□□□ -1.78
BCAS3Q9H6U6 EI24P1-201ENST00000416584 867 ntBASIC3.96□□□□□ -1.78
BCAS3Q9H6U6 AC244098.2-201ENST00000422068 99 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms