Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 Y_RNA.703-201ENST00000516846 111 ntBASIC4.42□□□□□ -1.7
CNTNAP4Q9C0A0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.42□□□□□ -1.7
CNTNAP4Q9C0A0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.42□□□□□ -1.7
CNTNAP4Q9C0A0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.42□□□□□ -1.7
CNTNAP4Q9C0A0 MIR1244-1-201ENST00000612829 85 ntBASIC4.42□□□□□ -1.7
CNTNAP4Q9C0A0 MIR1244-3-201ENST00000635744 85 ntBASIC4.42□□□□□ -1.7
CNTNAP4Q9C0A0 MIR1244-2-201ENST00000636449 85 ntBASIC4.42□□□□□ -1.7
CNTNAP4Q9C0A0 Z99571.1-201ENST00000636677 394 ntBASIC4.42□□□□□ -1.7
CNTNAP4Q9C0A0 MIR1244-4-202ENST00000636813 85 ntBASIC4.42□□□□□ -1.7
CNTNAP4Q9C0A0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 USP8P1-201ENST00000494673 3183 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 LINC01355-201ENST00000566551 5444 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 MTND5P9-201ENST00000503854 1755 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 MIR412-201ENST00000362142 91 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 Y_RNA.27-201ENST00000362540 103 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 Y_RNA.33-201ENST00000362591 102 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 Y_RNA.274-201ENST00000364714 101 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 Y_RNA.533-201ENST00000384596 114 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 MIR153-1-201ENST00000384914 90 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 AL357075.1-201ENST00000404107 726 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 U3.42-201ENST00000408746 214 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 RNA5SP306-201ENST00000411087 107 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 RAC1P3-201ENST00000416129 580 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 AC092423.1-201ENST00000430165 186 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 AL589765.3-201ENST00000446084 462 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 HSPE1P6-201ENST00000479457 291 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 RPS23P5-201ENST00000495419 428 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 RNU6-570P-201ENST00000517051 105 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 AL158827.2-201ENST00000602494 330 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 AC127459.3-201ENST00000624328 466 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 AL691447.3-201ENST00000635020 330 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 AC007656.2-201ENST00000624902 4547 ntBASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CNTNAP4Q9C0A0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CNTNAP4Q9C0A0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CNTNAP4Q9C0A0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.4□□□□□ -1.7
CNTNAP4Q9C0A0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 Z75746.1-201ENST00000440243 2080 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 AP000560.1-201ENST00000624150 1937 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 Y_RNA.29-201ENST00000362570 113 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 U3.13-201ENST00000364804 214 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 Y_RNA.506-201ENST00000384494 102 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-1203P-201ENST00000410703 110 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 RNU2-25P-201ENST00000411041 191 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 CKS1BP5-201ENST00000434172 273 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 AC098831.1-201ENST00000440661 216 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 RPEP5-201ENST00000441137 268 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 RN7SKP210-201ENST00000459176 261 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 HMGN2P13-201ENST00000476476 274 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 RN7SL429P-201ENST00000479090 223 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 RN7SL489P-201ENST00000486185 223 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 RN7SL327P-201ENST00000488659 223 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 SUMO2P6-201ENST00000505273 288 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 RNU1-86P-201ENST00000516108 154 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-397P-201ENST00000516226 104 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 RNU1-107P-201ENST00000516617 154 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 MIR2355-201ENST00000517199 87 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 AC109479.2-201ENST00000517842 174 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 RN7SL853P-201ENST00000617250 223 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CNTNAP4Q9C0A0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 RNY1-201ENST00000364228 113 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-1317P-201ENST00000364582 104 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 Y_RNA.270-201ENST00000364693 104 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-338P-201ENST00000383888 105 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 MIR513A2-201ENST00000385249 127 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 AL160275.2-201ENST00000412010 394 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 AL592045.1-201ENST00000429867 352 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 RPS29P31-201ENST00000446147 164 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 RNU6-1212P-201ENST00000517023 104 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 ATP5F1P5-201ENST00000526403 760 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 AC005951.2-201ENST00000576282 495 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 MIR548AI-201ENST00000579940 88 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 AC010900.2-201ENST00000604508 210 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 AL353748.2-201ENST00000622148 471 ntBASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CNTNAP4Q9C0A0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CNTNAP4Q9C0A0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms