Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SNORA3A-201ENST00000364113 130 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 SNORA25.9-201ENST00000365087 128 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 XKRYP1-201ENST00000423438 492 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 RPL23AP30-201ENST00000432419 501 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 XKRYP2-201ENST00000432915 492 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 MTND5P2-201ENST00000442927 1142 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AC140059.1-201ENST00000489238 361 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 RPL36AP21-201ENST00000490372 323 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 HMGB3P17-201ENST00000504195 649 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AC010587.1-201ENST00000505809 469 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AF213884.2-201ENST00000510417 903 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 SMURF2P1-201ENST00000514992 481 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 RNA5SP445-201ENST00000515889 115 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 CBX3P7-201ENST00000532876 502 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 CBX3P4-201ENST00000538909 354 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 MIR3618-201ENST00000580330 88 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AC008749.1-201ENST00000597650 306 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AL359999.1-201ENST00000604513 294 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AP002360.4-201ENST00000606980 481 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 AC138627.2-201ENST00000624202 601 ntBASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 Y_RNA.33-201ENST00000362591 102 ntBASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 AL133475.1-201ENST00000404414 305 ntBASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 SNRPGP9-201ENST00000456025 225 ntBASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 AC112771.1-201ENST00000463581 102 ntBASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 AC008526.1-201ENST00000509149 338 ntBASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 RNU5B-3P-201ENST00000516601 115 ntBASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 DNAJC19P9-201ENST00000555084 351 ntBASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 AC024614.2-201ENST00000577584 372 ntBASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 MIR4303-201ENST00000581299 66 ntBASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 MIR7844-201ENST00000616161 122 ntBASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 AC009878.1-201ENST00000621819 340 ntBASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RPAP1Q9BWH6 AC103710.2-202ENST00000641454 2853 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AC073343.1-201ENST00000328239 651 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 RNU4-1-201ENST00000363925 141 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 RNU6-234P-201ENST00000365229 104 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 RNU6-190P-201ENST00000384154 102 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 SNORD23.1-201ENST00000408212 104 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 HIGD1AP15-201ENST00000416198 280 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AC010099.3-201ENST00000423896 409 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AC137499.1-201ENST00000427602 88 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AL645568.3-201ENST00000433683 316 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AL451074.3-201ENST00000437709 472 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AC003071.1-201ENST00000451219 789 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 OR5B19P-201ENST00000531766 928 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AC079598.5-201ENST00000547460 117 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AC104581.2-201ENST00000572227 430 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AC022022.2-201ENST00000602989 360 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AL138963.2-201ENST00000605137 226 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 MIR502-201ENST00000606349 86 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AC009233.1-201ENST00000616477 371 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AC092140.2-201ENST00000618027 521 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AL162373.1-201ENST00000620433 407 ntBASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.06□□□□□ -2.08
RPAP1Q9BWH6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 Y_RNA.116-201ENST00000363292 103 ntBASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 RNU6-395P-201ENST00000365662 106 ntBASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 MIR518E-201ENST00000385252 88 ntBASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 MRPL42P2-201ENST00000403169 426 ntBASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 CIR1P3-201ENST00000405137 479 ntBASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 AC114491.1-201ENST00000416095 246 ntBASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 EIF4EP4-201ENST00000424916 578 ntBASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 AL589872.1-201ENST00000426602 288 ntBASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 AC119618.1-201ENST00000434191 222 ntBASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 ZNF114P1-201ENST00000453500 292 ntBASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 AC068781.1-201ENST00000488231 618 ntBASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 AC018437.1-201ENST00000492214 406 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms