Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NDC1Q9BTX1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 ATP5A1P2-201ENST00000412323 255 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 DYNLT3P2-201ENST00000442517 295 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 OSTCP8-201ENST00000445117 448 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 OR2AQ1P-201ENST00000451972 200 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 PCNPP5-201ENST00000452246 481 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 RPL22P13-201ENST00000493291 347 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 RNU1-61P-201ENST00000516107 151 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 Y_RNA.668-201ENST00000516233 93 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 RNU7-4P-201ENST00000516961 62 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 Y_RNA.715-201ENST00000517082 110 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 AC040926.1-201ENST00000530195 238 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 AC006600.1-201ENST00000572529 153 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 AL161629.2-201ENST00000615347 275 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 AC048347.1-201ENST00000624621 427 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
NDC1Q9BTX1 CEP170P1-201ENST00000502249 4587 ntBASIC3.5□□□□□ -1.85
NDC1Q9BTX1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
NDC1Q9BTX1 MAPK10-372ENST00000641954 3413 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NDC1Q9BTX1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NDC1Q9BTX1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.49□□□□□ -1.85
NDC1Q9BTX1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NDC1Q9BTX1 MIR423-201ENST00000362201 94 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 RNU6-784P-201ENST00000384330 106 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 MIR625-201ENST00000385047 85 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 MT-TR-201ENST00000387439 65 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 HSPE1P26-201ENST00000405341 275 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 RHEBP3-201ENST00000411920 351 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.49□□□□□ -1.85
NDC1Q9BTX1 AL117339.3-201ENST00000418733 162 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.49□□□□□ -1.85
NDC1Q9BTX1 U8.21-201ENST00000459536 136 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 AC084357.1-201ENST00000473404 255 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 AC106707.2-201ENST00000484182 374 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 AC110768.1-201ENST00000509222 400 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 NDUFB4P9-201ENST00000511646 388 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 RN7SKP209-201ENST00000516888 304 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 RNU6-703P-201ENST00000516946 107 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NDC1Q9BTX1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.49□□□□□ -1.85
NDC1Q9BTX1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 AL161756.2-201ENST00000604597 246 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 U3.45-201ENST00000607547 219 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 AC004852.3-201ENST00000614131 326 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NDC1Q9BTX1 MTND5P27-201ENST00000428871 1720 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.49□□□□□ -1.85
NDC1Q9BTX1 ZNF299P-201ENST00000406845 1804 ntBASIC3.49□□□□□ -1.85
NDC1Q9BTX1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 Y_RNA.396-201ENST00000383949 103 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 MIR218-2-201ENST00000385006 110 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 RPL21P1-201ENST00000399532 476 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 RNU2-37P-201ENST00000410695 177 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 HMGN2P30-201ENST00000423237 256 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 AL159987.2-201ENST00000432754 307 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 RPS3AP12-201ENST00000443616 753 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 MTATP6P7-201ENST00000453315 681 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 MTCO3P8-201ENST00000453691 755 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 HMGN2P16-201ENST00000456802 261 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 AC093852.1-201ENST00000503587 266 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 RNU1-103P-201ENST00000516502 125 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 RN7SKP83-201ENST00000516512 178 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 AC008011.1-201ENST00000545989 227 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.48□□□□□ -1.85
NDC1Q9BTX1 AC004584.2-201ENST00000570407 410 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 MIR5696-201ENST00000578474 85 ntBASIC3.48□□□□□ -1.85
NDC1Q9BTX1 AC007179.3-201ENST00000604976 235 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms