Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RNU6-1025P-201ENST00000410629 104 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 MTCYBP8-201ENST00000422855 651 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AL358075.3-201ENST00000426289 226 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 CALM2P2-201ENST00000428512 440 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 GPR143P-201ENST00000434155 205 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 BRK1P2-201ENST00000442875 223 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AL118520.1-201ENST00000450770 291 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 FGF7P6-202ENST00000451282 293 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AL109933.2-201ENST00000452651 260 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AC025033.1-201ENST00000463883 194 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AC006512.1-201ENST00000468816 291 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 TRBV1-201ENST00000476502 284 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 RN7SL636P-201ENST00000497504 294 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 RNU6-572P-201ENST00000516724 80 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 RNU6-143P-201ENST00000516942 93 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 RNU6-835P-201ENST00000516974 104 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 SNORA31.19-201ENST00000517079 126 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 MTND1P35-201ENST00000526739 508 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AP001646.1-201ENST00000527936 915 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AC006199.1-201ENST00000548728 219 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AL157871.3-201ENST00000557231 293 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AC005498.1-201ENST00000592125 465 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AC174048.1-201ENST00000603389 144 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AP001330.5-201ENST00000607176 411 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 U4.5-201ENST00000617137 123 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 U6.99-201ENST00000637524 83 ntBASIC2.1□□□□□ -2.07
EBF4Q9BQW3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
EBF4Q9BQW3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 SNORD3E-201ENST00000362899 217 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 RNY4P14-201ENST00000363656 96 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 RNY1P12-201ENST00000364251 105 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 RNU6-534P-201ENST00000364877 106 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 CISD1P1-201ENST00000393907 327 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 RNU6-908P-201ENST00000410160 94 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 RPL30P16-201ENST00000419341 429 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 NUP35P1-201ENST00000422734 947 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AC006946.1-201ENST00000429106 328 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 MTND3P21-201ENST00000433774 331 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AL162395.1-201ENST00000457882 422 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 RPS29P15-201ENST00000458329 171 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 RPS29P25-201ENST00000481709 171 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AC022493.1-201ENST00000492984 337 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AC092436.1-201ENST00000506450 503 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AC117522.1-201ENST00000509821 380 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 RNA5SP401-201ENST00000515920 127 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 RNU6-581P-201ENST00000516214 105 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 SNORA31.6-201ENST00000516241 130 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 RNA5SP24-201ENST00000516478 95 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AC109329.2-201ENST00000519658 482 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AP003072.2-201ENST00000527756 676 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AC025678.1-201ENST00000567861 338 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AC008521.1-201ENST00000587471 187 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AC012507.3-201ENST00000603556 477 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 AC008945.2-201ENST00000606056 604 ntBASIC2.09□□□□□ -2.07
EBF4Q9BQW3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.09□□□□□ -2.07
EBF4Q9BQW3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.09□□□□□ -2.08
EBF4Q9BQW3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.09□□□□□ -2.08
EBF4Q9BQW3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
EBF4Q9BQW3 ADAM3A-203ENST00000461344 2157 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 MIR208A-201ENST00000362287 71 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 Y_RNA.89-201ENST00000363031 102 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 SNORA62.1-201ENST00000364287 154 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 SNORA68.1-201ENST00000364537 132 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 RNU6-108P-201ENST00000365558 107 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 Y_RNA.453-201ENST00000384223 109 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 RNU6-166P-201ENST00000384371 107 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 RNU6-443P-201ENST00000384780 107 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 MIR518D-201ENST00000385014 87 ntBASIC2.08□□□□□ -2.08
EBF4Q9BQW3 MIR301A-201ENST00000385261 86 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms