Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 SNORA79-201ENST00000408376 140 ntBASIC4.72□□□□□ -1.65
USB1Q9BQ65 RNA5SP201-201ENST00000410316 124 ntBASIC4.72□□□□□ -1.65
USB1Q9BQ65 Y_RNA.622-201ENST00000411091 108 ntBASIC4.72□□□□□ -1.65
USB1Q9BQ65 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.72□□□□□ -1.65
USB1Q9BQ65 AL139148.1-201ENST00000427122 680 ntBASIC4.72□□□□□ -1.65
USB1Q9BQ65 AC245047.4-201ENST00000433189 144 ntBASIC4.72□□□□□ -1.65
USB1Q9BQ65 AL158147.1-201ENST00000443970 75 ntBASIC4.72□□□□□ -1.65
USB1Q9BQ65 AC092754.1-201ENST00000472975 479 ntBASIC4.72□□□□□ -1.65
USB1Q9BQ65 RN7SL132P-201ENST00000478131 296 ntBASIC4.72□□□□□ -1.65
USB1Q9BQ65 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.72□□□□□ -1.65
USB1Q9BQ65 MIR378D2-201ENST00000580636 98 ntBASIC4.72□□□□□ -1.65
USB1Q9BQ65 AC007448.1-201ENST00000582714 234 ntBASIC4.72□□□□□ -1.65
USB1Q9BQ65 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.72□□□□□ -1.65
USB1Q9BQ65 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
USB1Q9BQ65 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USB1Q9BQ65 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USB1Q9BQ65 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USB1Q9BQ65 SCARNA15-201ENST00000607520 4325 ntBASIC4.72□□□□□ -1.65
USB1Q9BQ65 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
USB1Q9BQ65 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USB1Q9BQ65 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USB1Q9BQ65 AC112198.2-201ENST00000426589 6996 ntBASIC4.72□□□□□ -1.65
USB1Q9BQ65 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.72□□□□□ -1.65
USB1Q9BQ65 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
USB1Q9BQ65 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
USB1Q9BQ65 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.71□□□□□ -1.65
USB1Q9BQ65 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USB1Q9BQ65 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
USB1Q9BQ65 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.71□□□□□ -1.66
USB1Q9BQ65 SNORA17.1-201ENST00000362945 126 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 SNORD45.3-201ENST00000363836 72 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 U8.7-201ENST00000364940 136 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 SNORD116-21-201ENST00000384507 92 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 SPTLC1P2-201ENST00000407089 121 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 SNORA11B-201ENST00000408175 129 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.71□□□□□ -1.66
USB1Q9BQ65 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.71□□□□□ -1.66
USB1Q9BQ65 AC073465.2-201ENST00000440938 498 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.71□□□□□ -1.66
USB1Q9BQ65 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.71□□□□□ -1.66
USB1Q9BQ65 RPS29P2-201ENST00000479278 136 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 RNU6-1061P-201ENST00000516530 99 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 EIF4A1P12-201ENST00000551910 141 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 MIR7853-201ENST00000584820 132 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 AC099778.2-201ENST00000610904 211 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 AC112200.1-201ENST00000625015 234 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
USB1Q9BQ65 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
USB1Q9BQ65 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
USB1Q9BQ65 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.71□□□□□ -1.66
USB1Q9BQ65 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
USB1Q9BQ65 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USB1Q9BQ65 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.7□□□□□ -1.66
USB1Q9BQ65 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
USB1Q9BQ65 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
USB1Q9BQ65 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
USB1Q9BQ65 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.7□□□□□ -1.66
USB1Q9BQ65 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USB1Q9BQ65 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USB1Q9BQ65 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USB1Q9BQ65 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USB1Q9BQ65 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.7□□□□□ -1.66
USB1Q9BQ65 RNU1-75P-201ENST00000347264 129 ntBASIC4.7□□□□□ -1.66
USB1Q9BQ65 U3.3-201ENST00000362986 216 ntBASIC4.7□□□□□ -1.66
USB1Q9BQ65 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.7□□□□□ -1.66
USB1Q9BQ65 RPS27P18-201ENST00000431701 247 ntBASIC4.7□□□□□ -1.66
USB1Q9BQ65 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.7□□□□□ -1.66
USB1Q9BQ65 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.7□□□□□ -1.66
USB1Q9BQ65 AC117454.1-201ENST00000491120 168 ntBASIC4.7□□□□□ -1.66
USB1Q9BQ65 AC072052.1-201ENST00000496556 306 ntBASIC4.7□□□□□ -1.66
USB1Q9BQ65 AC091868.1-201ENST00000508746 304 ntBASIC4.7□□□□□ -1.66
USB1Q9BQ65 AP006245.2-201ENST00000522004 300 ntBASIC4.7□□□□□ -1.66
USB1Q9BQ65 HMGN2P6-201ENST00000551091 273 ntBASIC4.7□□□□□ -1.66
USB1Q9BQ65 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USB1Q9BQ65 AC011447.4-201ENST00000587562 111 ntBASIC4.7□□□□□ -1.66
USB1Q9BQ65 ARF4P1-201ENST00000605447 541 ntBASIC4.7□□□□□ -1.66
USB1Q9BQ65 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
USB1Q9BQ65 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
USB1Q9BQ65 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USB1Q9BQ65 LINC01355-201ENST00000566551 5444 ntBASIC4.7□□□□□ -1.66
USB1Q9BQ65 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.7□□□□□ -1.66
USB1Q9BQ65 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.7□□□□□ -1.66
USB1Q9BQ65 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.69□□□□□ -1.66
USB1Q9BQ65 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USB1Q9BQ65 AC063976.2-201ENST00000425667 3556 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USB1Q9BQ65 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USB1Q9BQ65 Z73965.1-201ENST00000623412 2297 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.69□□□□□ -1.66
USB1Q9BQ65 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.69□□□□□ -1.66
USB1Q9BQ65 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
USB1Q9BQ65 RNA5SP507-201ENST00000363603 121 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 SNORA74A-201ENST00000364089 198 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 RN7SKP153-201ENST00000365026 316 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 SNORA18.2-201ENST00000383865 132 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 MIR195-201ENST00000385194 87 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 MIR548A3-201ENST00000385297 97 ntBASIC4.69□□□□□ -1.66
USB1Q9BQ65 SNORA36B-201ENST00000410438 131 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms