Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.01□□□□□ -2.41
COL12A1Q99715 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.01□□□□□ -2.41
COL12A1Q99715 MIR3937-201ENST00000580135 106 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 MIR8074-201ENST00000615081 81 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 uc_338.34-201ENST00000617467 174 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 AC138627.2-201ENST00000624202 601 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 MIR424-201ENST00000362227 98 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 SNORA16.2-201ENST00000390991 127 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.01□□□□□ -2.41
COL12A1Q99715 RPS26P5-201ENST00000418544 335 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 HMGB1P35-201ENST00000503360 598 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.01□□□□□ -2.41
COL12A1Q99715 AC139769.3-201ENST00000618383 175 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 MTND5P30-201ENST00000452896 1731 ntBASIC0.01□□□□□ -2.41
COL12A1Q99715 AC138393.1-203ENST00000327086 343 ntBASIC0□□□□□ -2.41
COL12A1Q99715 Y_RNA.190-201ENST00000363964 101 ntBASIC0□□□□□ -2.41
COL12A1Q99715 RNU6-10P-201ENST00000384036 107 ntBASIC0□□□□□ -2.41
COL12A1Q99715 RNU6-1297P-201ENST00000384415 104 ntBASIC0□□□□□ -2.41
COL12A1Q99715 RNU6-15P-201ENST00000384534 107 ntBASIC0□□□□□ -2.41
COL12A1Q99715 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0□□□□□ -2.41
COL12A1Q99715 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0□□□□□ -2.41
COL12A1Q99715 RPL18AP17-201ENST00000455326 198 ntBASIC0□□□□□ -2.41
COL12A1Q99715 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0□□□□□ -2.41
COL12A1Q99715 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0□□□□□ -2.41
COL12A1Q99715 AC107953.1-201ENST00000522216 297 ntBASIC0□□□□□ -2.41
COL12A1Q99715 AP001328.1-201ENST00000528550 176 ntBASIC0□□□□□ -2.41
COL12A1Q99715 AC136619.2-201ENST00000563361 631 ntBASIC0□□□□□ -2.41
COL12A1Q99715 AL356432.3-201ENST00000568952 465 ntBASIC0□□□□□ -2.41
COL12A1Q99715 MIR3165-201ENST00000579874 75 ntBASIC0□□□□□ -2.41
COL12A1Q99715 AC017083.3-201ENST00000609955 700 ntBASIC0□□□□□ -2.41
COL12A1Q99715 RN7SL660P-201ENST00000614852 299 ntBASIC0□□□□□ -2.41
COL12A1Q99715 MIR6738-201ENST00000619620 64 ntBASIC0□□□□□ -2.41
COL12A1Q99715 Y_RNA.180-201ENST00000363867 113 ntBASIC0□□□□□ -2.41
COL12A1Q99715 USP9YP26-201ENST00000421008 661 ntBASIC0□□□□□ -2.41
COL12A1Q99715 USP9YP18-201ENST00000425912 695 ntBASIC0□□□□□ -2.41
COL12A1Q99715 USP9YP17-201ENST00000444617 696 ntBASIC0□□□□□ -2.41
COL12A1Q99715 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0□□□□□ -2.41
COL12A1Q99715 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0□□□□□ -2.41
COL12A1Q99715 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0□□□□□ -2.41
COL12A1Q99715 RNU2-12P-201ENST00000517216 168 ntBASIC0□□□□□ -2.41
COL12A1Q99715 AP003066.2-201ENST00000529375 555 ntBASIC0□□□□□ -2.41
COL12A1Q99715 AC008759.3-201ENST00000613300 508 ntBASIC0□□□□□ -2.41
COL12A1Q99715 AC015726.3-201ENST00000624501 418 ntBASIC0□□□□□ -2.41
COL12A1Q99715 MIR518A1-201ENST00000385068 85 ntBASIC-0□□□□□ -2.41
COL12A1Q99715 AL034374.1-201ENST00000406329 351 ntBASIC-0□□□□□ -2.41
COL12A1Q99715 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0□□□□□ -2.41
COL12A1Q99715 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC-0□□□□□ -2.41
COL12A1Q99715 TRBVA-201ENST00000498804 316 ntBASIC-0□□□□□ -2.41
COL12A1Q99715 RNU6-1247P-201ENST00000516622 98 ntBASIC-0□□□□□ -2.41
COL12A1Q99715 AL121992.2-201ENST00000606262 256 ntBASIC-0□□□□□ -2.41
COL12A1Q99715 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0□□□□□ -2.41
COL12A1Q99715 AC021506.2-201ENST00000612354 169 ntBASIC-0□□□□□ -2.41
COL12A1Q99715 AC068647.2-201ENST00000637380 353 ntBASIC-0□□□□□ -2.41
COL12A1Q99715 AC005832.2-201ENST00000538921 1430 ntBASIC-0.01□□□□□ -2.41
COL12A1Q99715 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC-0.01□□□□□ -2.41
COL12A1Q99715 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.01□□□□□ -2.41
COL12A1Q99715 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.01□□□□□ -2.41
COL12A1Q99715 AL669831.1-202ENST00000428504 417 ntBASIC-0.01□□□□□ -2.41
COL12A1Q99715 AC010409.1-201ENST00000487382 476 ntBASIC-0.01□□□□□ -2.41
COL12A1Q99715 MTND2P17-201ENST00000550281 688 ntBASIC-0.01□□□□□ -2.41
COL12A1Q99715 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.01□□□□□ -2.41
COL12A1Q99715 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.01□□□□□ -2.41
COL12A1Q99715 snoU13.25-201ENST00000458945 104 ntBASIC-0.01□□□□□ -2.41
COL12A1Q99715 AC069114.2-201ENST00000604699 304 ntBASIC-0.01□□□□□ -2.41
COL12A1Q99715 AL591926.4-201ENST00000616895 298 ntBASIC-0.01□□□□□ -2.41
COL12A1Q99715 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
COL12A1Q99715 RNFT1P2-201ENST00000443064 757 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 VPS26AP1-201ENST00000483197 979 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 RNU6ATAC13P-201ENST00000516152 131 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL12A1Q99715 AC090888.1-201ENST00000561335 1141 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 MIR3115-201ENST00000577915 68 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 MIR6134-201ENST00000617606 109 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AC009950.2-201ENST00000636548 183 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 RNA5SP214-201ENST00000363378 118 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 U6atac.2-201ENST00000408644 118 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL12A1Q99715 RPS24P7-201ENST00000416921 246 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC-0.02□□□□□ -2.41
COL12A1Q99715 Z77249.1-201ENST00000444622 1175 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AC006512.1-201ENST00000468816 291 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AC147055.4-201ENST00000504399 745 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AC114811.1-201ENST00000507207 168 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL12A1Q99715 AP003034.1-201ENST00000534621 422 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL12A1Q99715 PCNAP1-202ENST00000595299 752 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AL590229.1-201ENST00000603497 542 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AC080013.4-201ENST00000607624 649 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AL596245.1-201ENST00000618994 362 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 OR5AK4P-201ENST00000635912 903 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.02□□□□□ -2.41
COL12A1Q99715 SNORD44.1-201ENST00000363202 61 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 SNORA32.1-201ENST00000364514 115 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 HMGN2P39-201ENST00000398005 273 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 MTND2P8-201ENST00000450555 1025 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 AC013267.1-201ENST00000458227 267 ntBASIC-0.02□□□□□ -2.41
COL12A1Q99715 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL12A1Q99715 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.02□□□□□ -2.41
COL12A1Q99715 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms