| MUC4 | Q99102 | AC108729.2-201 | ENST00000476543 | 840 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AL139147.1-201 | ENST00000502413 | 1156 nt | TSL 2 BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC108935.1-201 | ENST00000504874 | 518 nt | TSL 2 BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC097467.3-213 | ENST00000508191 | 726 nt | TSL 3 BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | PTP4A1P4-201 | ENST00000512479 | 322 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU6-703P-201 | ENST00000516946 | 107 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | OR5B19P-201 | ENST00000531766 | 928 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC079148.1-201 | ENST00000565944 | 819 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | FARSBP1-201 | ENST00000435808 | 1778 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | LINC01790-201 | ENST00000447194 | 2852 nt | TSL 2 BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AGR3-201 | ENST00000310398 | 749 nt | APPRIS P1 TSL 1 (best) BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU6-858P-201 | ENST00000362436 | 107 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | MIR1262-201 | ENST00000408276 | 93 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | DPRXP1-201 | ENST00000426312 | 460 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC118469.1-201 | ENST00000442943 | 488 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RPL7P55-201 | ENST00000450522 | 746 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | OFD1P7Y-201 | ENST00000454643 | 1155 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | SNORD97-201 | ENST00000459187 | 142 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RPL30P12-201 | ENST00000474666 | 353 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | ARL2BPP4-201 | ENST00000506854 | 471 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC022861.1-201 | ENST00000522981 | 663 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | ACTG1P17-203 | ENST00000561222 | 537 nt | TSL 3 BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC012414.6-201 | ENST00000568241 | 401 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC012065.4-201 | ENST00000602445 | 679 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | OR4H6P-202 | ENST00000603819 | 340 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC069545.1-201 | ENST00000605671 | 358 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC021755.4-201 | ENST00000616620 | 456 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | HFM1-201 | ENST00000370425 | 4931 nt | APPRIS P1 TSL 1 (best) BASIC | 0.77 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | MIR424-201 | ENST00000362227 | 98 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU6-898P-201 | ENST00000365627 | 104 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU6-1300P-201 | ENST00000391046 | 108 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | MTCO1P56-201 | ENST00000401674 | 224 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | CR848007.2-201 | ENST00000424918 | 787 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | CST2P1-201 | ENST00000425770 | 87 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC244035.3-201 | ENST00000428399 | 271 nt | TSL 2 BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | TRBV26OR9-2-201 | ENST00000432077 | 293 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | MTCO3P45-201 | ENST00000443036 | 613 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC008379.1-201 | ENST00000463655 | 464 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RPL7P43-201 | ENST00000478876 | 753 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC023194.1-201 | ENST00000493084 | 308 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC008628.1-201 | ENST00000508663 | 265 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC010420.1-201 | ENST00000515077 | 509 nt | TSL 3 BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU6-927P-201 | ENST00000516199 | 100 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | LINC00557-201 | ENST00000563184 | 1279 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | CENPF-206 | ENST00000614578 | 528 nt | TSL 5 BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AL109933.3-201 | ENST00000619095 | 188 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU6-1167P-201 | ENST00000363227 | 94 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU6-114P-201 | ENST00000384704 | 105 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNA5SP501-201 | ENST00000410990 | 112 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AL139421.1-201 | ENST00000423010 | 169 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | LINC01680-201 | ENST00000434983 | 299 nt | TSL 2 BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC015922.2-201 | ENST00000435593 | 184 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC020550.1-201 | ENST00000447385 | 163 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AL008723.1-201 | ENST00000452181 | 590 nt | TSL 5 BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC005908.1-201 | ENST00000468701 | 347 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC108752.1-203 | ENST00000496674 | 339 nt | TSL 5 BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC098862.1-201 | ENST00000504991 | 413 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | LINC01897-203 | ENST00000591503 | 369 nt | TSL 2 BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | MIR8084-201 | ENST00000614105 | 89 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | OR8H2-202 | ENST00000618136 | 1038 nt | APPRIS ALT1 BASIC | 0.76 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | SNORD1A-201 | ENST00000364968 | 72 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU2-36P-201 | ENST00000410361 | 191 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU2-48P-201 | ENST00000410694 | 191 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC004870.3-202 | ENST00000412996 | 432 nt | TSL 3 BASIC | 0.75 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC092648.1-201 | ENST00000425870 | 423 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AL353718.1-201 | ENST00000451028 | 517 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU6-1132P-201 | ENST00000459214 | 107 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC092989.1-201 | ENST00000481235 | 277 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | CBX3P8-201 | ENST00000532412 | 525 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | LINC02384-205 | ENST00000539404 | 785 nt | TSL 3 BASIC | 0.75 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | SNORD114-21-201 | ENST00000606412 | 72 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC010975.3-201 | ENST00000618727 | 978 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | VTRNA1-3-201 | ENST00000365645 | 89 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | SUGT1P1-201 | ENST00000379514 | 476 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | TRDJ2-201 | ENST00000390475 | 54 nt | APPRIS P1 BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | TRAJ39-201 | ENST00000390498 | 63 nt | APPRIS P1 BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | BX664727.1-201 | ENST00000416024 | 466 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | MTND1P28-201 | ENST00000435623 | 950 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU7-140P-201 | ENST00000459546 | 60 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC010468.3-201 | ENST00000508225 | 458 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC108517.1-201 | ENST00000512546 | 327 nt | TSL 3 BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU6-678P-201 | ENST00000516832 | 109 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU6-586P-201 | ENST00000517265 | 104 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | MIR3937-201 | ENST00000580135 | 106 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AL583856.2-201 | ENST00000606298 | 543 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AL031775.1-201 | ENST00000607014 | 887 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | MIR6857-201 | ENST00000613267 | 93 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | ATG5-207 | ENST00000613993 | 733 nt | TSL 1 (best) BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | DSCR8-208 | ENST00000614538 | 403 nt | APPRIS P5 TSL 5 BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AL445264.1-201 | ENST00000621719 | 171 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | MTND4P12-201 | ENST00000498999 | 1377 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU6-353P-201 | ENST00000364266 | 108 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU6-549P-201 | ENST00000384433 | 107 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | RNU6-160P-201 | ENST00000384591 | 107 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | LINC01934-201 | ENST00000414750 | 391 nt | TSL 3 BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | CLYBL-AS1-201 | ENST00000416009 | 621 nt | TSL 3 BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | DEFB130D-201 | ENST00000426866 | 237 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AC092634.2-201 | ENST00000428146 | 1010 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | AL138799.4-201 | ENST00000443939 | 643 nt | TSL 3 BASIC | 0.74 | □□□□□ -2.29 | | |
| MUC4 | Q99102 | USP9YP17-201 | ENST00000444617 | 696 nt | BASIC | 0.74 | □□□□□ -2.29 | | |