Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 HSPE1P19-201ENST00000603327 295 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AL583856.2-201ENST00000606298 543 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AC093788.1-201ENST00000609356 927 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AC090970.3-201ENST00000612566 866 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.9□□□□□ -2.27
LYSMD1Q96S90 AC092447.10-201ENST00000620607 1652 ntBASIC0.9□□□□□ -2.27
LYSMD1Q96S90 FARSBP1-201ENST00000435808 1778 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 AL079343.1-201ENST00000572358 1771 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.89□□□□□ -2.27
LYSMD1Q96S90 CYCSP33-201ENST00000414485 327 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.89□□□□□ -2.27
LYSMD1Q96S90 RPS27P16-201ENST00000425758 201 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 USP9YP18-201ENST00000425912 695 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.89□□□□□ -2.27
LYSMD1Q96S90 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.89□□□□□ -2.27
LYSMD1Q96S90 USP9YP17-201ENST00000444617 696 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 TAF9P1-201ENST00000445421 515 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 TAF9P2-201ENST00000454958 515 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 AC104563.1-201ENST00000476147 376 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 AP001025.1-201ENST00000486139 332 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 AC104629.1-201ENST00000494226 508 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 SNORA77B-201ENST00000578179 125 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.89□□□□□ -2.27
LYSMD1Q96S90 AC136443.5-201ENST00000603741 370 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 MIR8084-201ENST00000614105 89 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 uc_338.15-201ENST00000615470 191 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 AC099654.9-201ENST00000637055 678 ntBASIC0.89□□□□□ -2.27
LYSMD1Q96S90 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
LYSMD1Q96S90 RNU6-23P-201ENST00000363283 107 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 SNORD1A-201ENST00000364968 72 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 FTH1P15-201ENST00000406984 280 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.88□□□□□ -2.27
LYSMD1Q96S90 MTCO3P5-201ENST00000433620 714 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.88□□□□□ -2.27
LYSMD1Q96S90 RPL39P29-201ENST00000447779 157 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 RPL23AP35-201ENST00000451906 501 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 RNU6-775P-201ENST00000459318 96 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 AC121161.1-201ENST00000510606 652 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 AF131216.2-201ENST00000512316 564 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 AC008837.2-201ENST00000513076 418 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 SNORA31.3-201ENST00000516029 96 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 RNU6-751P-201ENST00000516382 101 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 RNU6-572P-201ENST00000516724 80 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.88□□□□□ -2.27
LYSMD1Q96S90 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.88□□□□□ -2.27
LYSMD1Q96S90 RAB11AP2-201ENST00000545905 639 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.88□□□□□ -2.27
LYSMD1Q96S90 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.88□□□□□ -2.27
LYSMD1Q96S90 SUB1P4-201ENST00000566062 339 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 VN1R107P-201ENST00000601784 209 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 AL445435.1-201ENST00000604232 665 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 AL078604.3-201ENST00000615580 211 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 AC009269.6-201ENST00000621778 588 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 MIR8063-201ENST00000621930 81 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 MTND5P9-201ENST00000503854 1755 ntBASIC0.88□□□□□ -2.27
LYSMD1Q96S90 MIR302D-201ENST00000362275 68 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 RNU5B-1-201ENST00000363286 116 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 RNU6-529P-201ENST00000363383 104 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 SNORA18.2-201ENST00000383865 132 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 SNORA70.7-201ENST00000384159 133 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 MIR499A-201ENST00000384903 122 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 MTCO1P56-201ENST00000401674 224 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 AL359634.1-202ENST00000404721 284 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 HMGN1P14-201ENST00000412459 517 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.87□□□□□ -2.27
LYSMD1Q96S90 CST2P1-201ENST00000425770 87 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.87□□□□□ -2.27
LYSMD1Q96S90 DYNLT3P2-201ENST00000442517 295 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 MTND1P31-201ENST00000449206 961 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 AC079776.3-201ENST00000450665 370 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.87□□□□□ -2.27
LYSMD1Q96S90 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.87□□□□□ -2.27
LYSMD1Q96S90 RNU7-40P-201ENST00000516397 64 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 RN7SKP265-201ENST00000516448 223 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.87□□□□□ -2.27
LYSMD1Q96S90 AC018630.3-201ENST00000542637 96 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 AC090115.3-201ENST00000553218 849 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 TRAV32-201ENST00000553993 340 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.87□□□□□ -2.27
LYSMD1Q96S90 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.87□□□□□ -2.27
LYSMD1Q96S90 FAM71BP1-201ENST00000604431 523 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.87□□□□□ -2.27
LYSMD1Q96S90 AC008993.2-201ENST00000631744 806 ntBASIC0.87□□□□□ -2.27
LYSMD1Q96S90 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
LYSMD1Q96S90 RNU11-5P-201ENST00000391216 129 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 AC119751.3-201ENST00000399720 670 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.86□□□□□ -2.27
LYSMD1Q96S90 AC139712.2-201ENST00000424302 339 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 AC027119.1-201ENST00000440877 241 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 MTCO3P43-201ENST00000440974 771 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
LYSMD1Q96S90 MTND5P14-201ENST00000441481 1267 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 ELOCP30-201ENST00000447108 299 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
LYSMD1Q96S90 AL133373.1-201ENST00000497098 94 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 HMGN1P13-201ENST00000505795 138 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 RN7SKP256-201ENST00000517201 314 ntBASIC0.86□□□□□ -2.27
LYSMD1Q96S90 AC009902.1-201ENST00000519351 183 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms