Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.06□□□□□ -2.24
PCDH15Q96QU1 USP9YP24-201ENST00000434374 697 ntBASIC1.06□□□□□ -2.24
PCDH15Q96QU1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.06□□□□□ -2.24
PCDH15Q96QU1 AL161788.1-201ENST00000441805 169 ntBASIC1.06□□□□□ -2.24
PCDH15Q96QU1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.06□□□□□ -2.24
PCDH15Q96QU1 OR6C5P-201ENST00000452388 923 ntBASIC1.06□□□□□ -2.24
PCDH15Q96QU1 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.06□□□□□ -2.24
PCDH15Q96QU1 AL441985.1-201ENST00000457727 251 ntBASIC1.06□□□□□ -2.24
PCDH15Q96QU1 RPL30P12-201ENST00000474666 353 ntBASIC1.06□□□□□ -2.24
PCDH15Q96QU1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
PCDH15Q96QU1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.06□□□□□ -2.24
PCDH15Q96QU1 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.06□□□□□ -2.24
PCDH15Q96QU1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.06□□□□□ -2.24
PCDH15Q96QU1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.06□□□□□ -2.24
PCDH15Q96QU1 AL391001.1-201ENST00000602747 715 ntBASIC1.06□□□□□ -2.24
PCDH15Q96QU1 AL391646.1-201ENST00000603860 190 ntBASIC1.06□□□□□ -2.24
PCDH15Q96QU1 AC131235.4-201ENST00000609288 620 ntBASIC1.06□□□□□ -2.24
PCDH15Q96QU1 AC021755.4-201ENST00000616620 456 ntBASIC1.06□□□□□ -2.24
PCDH15Q96QU1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.06□□□□□ -2.24
PCDH15Q96QU1 FARSBP1-201ENST00000435808 1778 ntBASIC1.06□□□□□ -2.24
PCDH15Q96QU1 RNU1-58P-201ENST00000362413 163 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 RNU5E-6P-201ENST00000365574 115 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 RNU6-516P-201ENST00000411381 104 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 MTCO1P17-201ENST00000411522 491 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 EEF1A1P39-201ENST00000440791 250 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AL031313.1-201ENST00000448435 256 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 BTF3P15-201ENST00000455606 336 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 MTND1P3-201ENST00000484956 952 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 RPL22P13-201ENST00000493291 347 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 RNU6-927P-201ENST00000516199 100 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AP005597.4-201ENST00000526762 229 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AC023158.2-201ENST00000614876 543 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AC097655.1-201ENST00000635075 318 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 RNU6-1257P-201ENST00000384625 110 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 Y_RNA.578-201ENST00000390903 88 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 RNU1-139P-201ENST00000391307 165 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 RNU2-39P-201ENST00000410604 198 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AC019178.2-201ENST00000423595 505 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 SKA2P1-201ENST00000425592 390 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 GTF2IP3-201ENST00000433887 494 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 RSU1P2-202ENST00000437884 485 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AP000949.1-201ENST00000438328 629 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AC016691.1-201ENST00000441321 413 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AC093852.1-201ENST00000503587 266 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AC113347.3-201ENST00000509113 148 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AC023538.1-201ENST00000534576 736 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 MIR3126-201ENST00000577443 74 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 AC068276.1-201ENST00000605793 379 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.05□□□□□ -2.24
PCDH15Q96QU1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.05□□□□□ -2.24
PCDH15Q96QU1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
PCDH15Q96QU1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
PCDH15Q96QU1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
PCDH15Q96QU1 SNORA16B-201ENST00000364674 135 ntBASIC1.04□□□□□ -2.24
PCDH15Q96QU1 SNORD116.1-201ENST00000365628 92 ntBASIC1.04□□□□□ -2.24
PCDH15Q96QU1 MIR561-201ENST00000385216 97 ntBASIC1.04□□□□□ -2.24
PCDH15Q96QU1 RNU2-3P-201ENST00000410144 191 ntBASIC1.04□□□□□ -2.24
PCDH15Q96QU1 RN7SKP266-201ENST00000410232 287 ntBASIC1.04□□□□□ -2.24
PCDH15Q96QU1 RNU4-22P-201ENST00000411058 166 ntBASIC1.04□□□□□ -2.24
PCDH15Q96QU1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.04□□□□□ -2.24
PCDH15Q96QU1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
PCDH15Q96QU1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.04□□□□□ -2.24
PCDH15Q96QU1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.04□□□□□ -2.24
PCDH15Q96QU1 RPL23AP35-201ENST00000451906 501 ntBASIC1.04□□□□□ -2.24
PCDH15Q96QU1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.04□□□□□ -2.24
PCDH15Q96QU1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.04□□□□□ -2.24
PCDH15Q96QU1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.04□□□□□ -2.24
PCDH15Q96QU1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.04□□□□□ -2.24
PCDH15Q96QU1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.04□□□□□ -2.24
PCDH15Q96QU1 AL031274.2-201ENST00000599419 203 ntBASIC1.04□□□□□ -2.24
PCDH15Q96QU1 BNIP3P9-201ENST00000603714 553 ntBASIC1.04□□□□□ -2.24
PCDH15Q96QU1 AC087045.1-201ENST00000605856 382 ntBASIC1.04□□□□□ -2.24
PCDH15Q96QU1 AC121333.1-201ENST00000567488 2709 ntBASIC1.04□□□□□ -2.24
PCDH15Q96QU1 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
PCDH15Q96QU1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
PCDH15Q96QU1 Y_RNA.234-201ENST00000364409 97 ntBASIC1.03□□□□□ -2.24
PCDH15Q96QU1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
PCDH15Q96QU1 Y_RNA.393-201ENST00000383936 102 ntBASIC1.03□□□□□ -2.24
PCDH15Q96QU1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.03□□□□□ -2.24
PCDH15Q96QU1 MIR1283-2-201ENST00000408621 87 ntBASIC1.03□□□□□ -2.24
PCDH15Q96QU1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.03□□□□□ -2.24
PCDH15Q96QU1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.03□□□□□ -2.24
PCDH15Q96QU1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.03□□□□□ -2.24
PCDH15Q96QU1 AC118469.1-201ENST00000442943 488 ntBASIC1.03□□□□□ -2.24
PCDH15Q96QU1 HSPE1P24-201ENST00000450782 238 ntBASIC1.03□□□□□ -2.24
PCDH15Q96QU1 AL049829.1-201ENST00000465411 156 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms