Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RN7SKP57-201ENST00000517248 293 ntBASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 AC004024.1-201ENST00000549244 247 ntBASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 AC136932.1-201ENST00000574771 208 ntBASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 MIR4300-201ENST00000581016 96 ntBASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 AL137843.1-201ENST00000605078 385 ntBASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 Y_RNA.772-201ENST00000606692 102 ntBASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 AL360181.4-201ENST00000621752 134 ntBASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 AL034408.1-202ENST00000636088 415 ntBASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 HAUS6P2-201ENST00000433254 2404 ntBASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNGAP1Q96PV0 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 SNORD14B-201ENST00000364533 90 ntBASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 MIR34A-201ENST00000385130 110 ntBASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 SNORD115-46-201ENST00000390982 71 ntBASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 RPL21P17-201ENST00000397467 475 ntBASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 AL117339.3-201ENST00000418733 162 ntBASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 TMEM167AP1-201ENST00000423409 219 ntBASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 SERF1AP1-201ENST00000514575 187 ntBASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 RNU6-237P-201ENST00000515985 71 ntBASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 RNU6-1256P-201ENST00000516539 103 ntBASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 AC090617.7-201ENST00000623952 126 ntBASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNGAP1Q96PV0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 LINC02555-201ENST00000563933 1951 ntBASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 AC018529.3-201ENST00000624212 2254 ntBASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 SDAD1P2-201ENST00000441308 2028 ntBASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 MTCYBP2-201ENST00000407745 171 ntBASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 MIR1298-201ENST00000408783 112 ntBASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 AL627311.1-201ENST00000431514 115 ntBASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 HMGN2P31-201ENST00000432430 273 ntBASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 snoU109.2-201ENST00000459316 135 ntBASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 TOMM22P6-201ENST00000465035 409 ntBASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 AL359273.1-201ENST00000510918 627 ntBASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 AC023824.2-201ENST00000566185 400 ntBASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNGAP1Q96PV0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 Z73965.1-201ENST00000623412 2297 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 Y_RNA.83-201ENST00000363005 113 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 RNU6-886P-201ENST00000384319 105 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 MTCO2P33-201ENST00000402100 465 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 MRPL35P1-201ENST00000404272 572 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 RNA5SP306-201ENST00000411087 107 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 RNA5SP39-201ENST00000411245 120 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 AL591419.1-201ENST00000427423 339 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 RPL21P40-201ENST00000428586 483 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 AC083863.1-201ENST00000438811 231 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 AL133162.1-201ENST00000463228 453 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 AL160314.1-201ENST00000490836 438 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 UBE2CP3-201ENST00000502715 450 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 SCARNA14-201ENST00000516903 136 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 AC109479.2-201ENST00000517842 174 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 AC011476.5-201ENST00000615594 130 ntBASIC4.45□□□□□ -1.7
SYNGAP1Q96PV0 AL356489.2-201ENST00000566968 3528 ntBASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.44□□□□□ -1.7
SYNGAP1Q96PV0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms