Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 RPL37P4-201ENST00000448908 268 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 RAB9AP1-201ENST00000449393 573 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 AL353705.4-201ENST00000449661 238 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 RPL23AP14-201ENST00000468281 468 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 AC022868.1-201ENST00000517767 391 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 AC025627.2-201ENST00000576220 160 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 AC240442.1-201ENST00000616055 283 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 AC048347.1-201ENST00000624621 427 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 LINC02471-203ENST00000641941 4752 ntBASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTCHD1Q96NR3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 AC010733.2-201ENST00000589496 5702 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 SRP72P2-201ENST00000344851 1979 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 RNU6-222P-201ENST00000362438 107 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 RNA5SP388-201ENST00000362584 119 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 SNORD78.2-201ENST00000391076 69 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 AL079342.1-201ENST00000401460 267 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 MRPL35P1-201ENST00000404272 572 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 RNA5SP129-201ENST00000410276 118 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 RNA5SP44-201ENST00000410446 133 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 RNU6-628P-201ENST00000410675 107 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 RNU6-1245P-201ENST00000411130 106 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 EIF1AXP1-201ENST00000419267 435 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 RNU6-1012P-201ENST00000516606 109 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 RNA5SP468-201ENST00000516782 93 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 RPL23AP88-201ENST00000605759 454 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 AC098479.1-201ENST00000609225 154 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 ZNF962P-201ENST00000443465 3140 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 AL133383.2-201ENST00000622958 2336 ntBASIC3.84□□□□□ -1.79
PTCHD1Q96NR3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.84□□□□□ -1.8
PTCHD1Q96NR3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PTCHD1Q96NR3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.84□□□□□ -1.8
PTCHD1Q96NR3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTCHD1Q96NR3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTCHD1Q96NR3 AC016588.2-201ENST00000632484 3021 ntBASIC3.84□□□□□ -1.8
PTCHD1Q96NR3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTCHD1Q96NR3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 RNU6-1301P-201ENST00000362724 104 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 SNORD74.4-201ENST00000364129 80 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 Y_RNA.352-201ENST00000365439 102 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 RNU6-1286P-201ENST00000383871 107 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 RNU6-17P-201ENST00000384245 107 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 RNU6-18P-201ENST00000384527 107 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 RPL21P65-201ENST00000406094 466 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 AL031659.1-201ENST00000447075 539 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 AL162151.2-201ENST00000448875 158 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 AL139109.1-201ENST00000455491 297 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 RN7SL585P-201ENST00000470538 280 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 RPS26P21-201ENST00000475397 348 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 RPL30P1-201ENST00000488676 339 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 GZMAP1-201ENST00000503054 631 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 RN7SKP21-201ENST00000516503 220 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 RNU7-143P-201ENST00000516781 65 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 AC023824.2-201ENST00000566185 400 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 MIR4659A-201ENST00000580269 81 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 MIR5684-201ENST00000585074 65 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 AC009779.6-201ENST00000603972 165 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 RMST_6.1-201ENST00000611980 203 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 MIR7151-201ENST00000617477 60 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 AC091903.1-201ENST00000624322 454 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 RNA5SP196-201ENST00000625967 102 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 AC022336.2-201ENST00000568966 2538 ntBASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCHD1Q96NR3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.82□□□□□ -1.8
PTCHD1Q96NR3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.82□□□□□ -1.8
PTCHD1Q96NR3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD1Q96NR3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD1Q96NR3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD1Q96NR3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTCHD1Q96NR3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.82□□□□□ -1.8
PTCHD1Q96NR3 MIR372-201ENST00000362225 67 ntBASIC3.82□□□□□ -1.8
PTCHD1Q96NR3 RNU6-884P-201ENST00000363889 107 ntBASIC3.82□□□□□ -1.8
PTCHD1Q96NR3 SNORD115-32-201ENST00000364079 82 ntBASIC3.82□□□□□ -1.8
PTCHD1Q96NR3 RN7SKP280-201ENST00000364196 304 ntBASIC3.82□□□□□ -1.8
PTCHD1Q96NR3 SNORD116-20-201ENST00000384529 92 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms