Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 AL713922.2-201ENST00000619384 716 ntBASIC4.14□□□□□ -1.75
FGD4Q96M96 SCARNA4-202ENST00000625402 129 ntBASIC4.14□□□□□ -1.75
FGD4Q96M96 MIR3651-201ENST00000630427 90 ntBASIC4.14□□□□□ -1.75
FGD4Q96M96 U4.7-201ENST00000638126 106 ntBASIC4.14□□□□□ -1.75
FGD4Q96M96 AP001486.2-201ENST00000561652 5113 ntBASIC4.14□□□□□ -1.75
FGD4Q96M96 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
FGD4Q96M96 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
FGD4Q96M96 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
FGD4Q96M96 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FGD4Q96M96 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FGD4Q96M96 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
FGD4Q96M96 MTND5P9-201ENST00000503854 1755 ntBASIC4.14□□□□□ -1.75
FGD4Q96M96 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.14□□□□□ -1.75
FGD4Q96M96 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FGD4Q96M96 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FGD4Q96M96 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.13□□□□□ -1.75
FGD4Q96M96 RNU6-525P-201ENST00000363685 104 ntBASIC4.13□□□□□ -1.75
FGD4Q96M96 RNU5E-7P-201ENST00000365290 117 ntBASIC4.13□□□□□ -1.75
FGD4Q96M96 RNU6-72P-201ENST00000384285 79 ntBASIC4.13□□□□□ -1.75
FGD4Q96M96 U3.42-201ENST00000408746 214 ntBASIC4.13□□□□□ -1.75
FGD4Q96M96 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.13□□□□□ -1.75
FGD4Q96M96 BX510359.1-201ENST00000456973 237 ntBASIC4.13□□□□□ -1.75
FGD4Q96M96 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.13□□□□□ -1.75
FGD4Q96M96 RNU6-377P-201ENST00000515965 102 ntBASIC4.13□□□□□ -1.75
FGD4Q96M96 RNU6-612P-201ENST00000516909 102 ntBASIC4.13□□□□□ -1.75
FGD4Q96M96 AC009812.2-201ENST00000517657 457 ntBASIC4.13□□□□□ -1.75
FGD4Q96M96 AC144568.1-201ENST00000520139 137 ntBASIC4.13□□□□□ -1.75
FGD4Q96M96 AC004584.2-201ENST00000570407 410 ntBASIC4.13□□□□□ -1.75
FGD4Q96M96 AL355598.1-201ENST00000604169 202 ntBASIC4.13□□□□□ -1.75
FGD4Q96M96 AC124312.5-201ENST00000604451 268 ntBASIC4.13□□□□□ -1.75
FGD4Q96M96 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
FGD4Q96M96 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FGD4Q96M96 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
FGD4Q96M96 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.13□□□□□ -1.75
FGD4Q96M96 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
FGD4Q96M96 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.12□□□□□ -1.75
FGD4Q96M96 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.12□□□□□ -1.75
FGD4Q96M96 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
FGD4Q96M96 RNU6-50P-201ENST00000362356 103 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 MIR325-201ENST00000385260 98 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
FGD4Q96M96 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.12□□□□□ -1.75
FGD4Q96M96 AC017079.2-201ENST00000416102 485 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.12□□□□□ -1.75
FGD4Q96M96 AC005300.1-201ENST00000428401 373 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 NDUFB1P1-201ENST00000435191 180 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.12□□□□□ -1.75
FGD4Q96M96 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.12□□□□□ -1.75
FGD4Q96M96 AC073910.1-201ENST00000445047 438 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 MTATP6P7-201ENST00000453315 681 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 SNRPGP5-201ENST00000456003 220 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 TRBV12-2-201ENST00000489763 344 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.12□□□□□ -1.75
FGD4Q96M96 AC026784.1-201ENST00000507986 352 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 MTND4LP22-201ENST00000508209 276 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.12□□□□□ -1.75
FGD4Q96M96 ZNF192P1-203ENST00000565888 810 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 MIR4782-201ENST00000577987 79 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 VN1R91P-201ENST00000594377 169 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.12□□□□□ -1.75
FGD4Q96M96 FTX_3.1-201ENST00000610451 147 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 HMGB1P24-202ENST00000615653 685 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 U7.8-201ENST00000619968 63 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 U2.21-201ENST00000637295 81 ntBASIC4.12□□□□□ -1.75
FGD4Q96M96 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.12□□□□□ -1.75
FGD4Q96M96 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.11□□□□□ -1.75
FGD4Q96M96 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FGD4Q96M96 TNPO1P3-201ENST00000436471 2662 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FGD4Q96M96 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FGD4Q96M96 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FGD4Q96M96 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FGD4Q96M96 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FGD4Q96M96 FTLP6-201ENST00000355274 422 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 SNORA63.7-201ENST00000365579 123 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 RNA5SP31-201ENST00000411144 127 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 AL512844.2-201ENST00000433990 593 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 RPS29P27-201ENST00000463711 170 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 RPL30P10-201ENST00000488148 337 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 AC010265.1-201ENST00000513509 211 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 RNU6-911P-201ENST00000516523 104 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 Y_RNA.715-201ENST00000517082 110 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.11□□□□□ -1.75
FGD4Q96M96 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.11□□□□□ -1.75
FGD4Q96M96 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.11□□□□□ -1.75
FGD4Q96M96 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.11□□□□□ -1.75
FGD4Q96M96 CYCSP39-201ENST00000565821 309 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.11□□□□□ -1.75
FGD4Q96M96 AC008962.1-201ENST00000605729 304 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 AC100812.1-201ENST00000607622 580 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.11□□□□□ -1.75
FGD4Q96M96 AC009318.2-201ENST00000610917 651 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.11□□□□□ -1.75
FGD4Q96M96 U6.99-201ENST00000637524 83 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FGD4Q96M96 AC090740.1-201ENST00000623193 2262 ntBASIC4.11□□□□□ -1.75
FGD4Q96M96 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FGD4Q96M96 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
FGD4Q96M96 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FGD4Q96M96 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms