Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 Y_RNA.319-201ENST00000365138 92 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
IFT43Q96FT9 Y_RNA.383-201ENST00000383855 97 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 RNU1-63P-201ENST00000383902 164 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 U8.10-201ENST00000384260 133 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 MIR513A2-201ENST00000385249 127 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 PPIAP31-201ENST00000405422 495 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 RNU6-394P-201ENST00000410735 107 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.56□□□□□ -1.68
IFT43Q96FT9 AC074117.2-201ENST00000417130 397 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 AL356387.2-201ENST00000422272 243 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 AC007395.1-201ENST00000451333 677 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.56□□□□□ -1.68
IFT43Q96FT9 RNA5SP446-201ENST00000515955 82 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 RNA5SP497-201ENST00000516081 97 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 Vault.1-201ENST00000516474 102 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 SNORA27.4-201ENST00000516650 95 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 CR383656.8-201ENST00000549046 145 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 HSPE1P5-201ENST00000561489 272 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.56□□□□□ -1.68
IFT43Q96FT9 MIR5695-201ENST00000579717 85 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 AL078605.1-201ENST00000603529 500 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 AL138963.2-201ENST00000605137 226 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 MIR6716-201ENST00000613413 80 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 MIR6134-201ENST00000617606 109 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 MIR4727-201ENST00000622232 55 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
IFT43Q96FT9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
IFT43Q96FT9 AC008725.1-201ENST00000605123 2263 ntBASIC4.56□□□□□ -1.68
IFT43Q96FT9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
IFT43Q96FT9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.56□□□□□ -1.68
IFT43Q96FT9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
IFT43Q96FT9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
IFT43Q96FT9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
IFT43Q96FT9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
IFT43Q96FT9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
IFT43Q96FT9 MIR410-201ENST00000362222 80 ntBASIC4.55□□□□□ -1.68
IFT43Q96FT9 RNA5SP509-201ENST00000364577 119 ntBASIC4.55□□□□□ -1.68
IFT43Q96FT9 RNU6-804P-201ENST00000384286 107 ntBASIC4.55□□□□□ -1.68
IFT43Q96FT9 SNORA46.1-201ENST00000391069 153 ntBASIC4.55□□□□□ -1.68
IFT43Q96FT9 RNU6-159P-201ENST00000391080 106 ntBASIC4.55□□□□□ -1.68
IFT43Q96FT9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.55□□□□□ -1.68
IFT43Q96FT9 COX6B1P7-201ENST00000430845 235 ntBASIC4.55□□□□□ -1.68
IFT43Q96FT9 NDUFB4P6-201ENST00000436819 366 ntBASIC4.55□□□□□ -1.68
IFT43Q96FT9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.55□□□□□ -1.68
IFT43Q96FT9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.55□□□□□ -1.68
IFT43Q96FT9 AC117440.1-201ENST00000474107 571 ntBASIC4.55□□□□□ -1.68
IFT43Q96FT9 AC078817.1-201ENST00000492623 435 ntBASIC4.55□□□□□ -1.68
IFT43Q96FT9 AC078918.1-201ENST00000498515 228 ntBASIC4.55□□□□□ -1.68
IFT43Q96FT9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.55□□□□□ -1.68
IFT43Q96FT9 RNU6-1198P-201ENST00000516904 67 ntBASIC4.55□□□□□ -1.68
IFT43Q96FT9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.55□□□□□ -1.68
IFT43Q96FT9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.55□□□□□ -1.68
IFT43Q96FT9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.55□□□□□ -1.68
IFT43Q96FT9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.55□□□□□ -1.68
IFT43Q96FT9 AC019159.1-201ENST00000605094 187 ntBASIC4.55□□□□□ -1.68
IFT43Q96FT9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.55□□□□□ -1.68
IFT43Q96FT9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.55□□□□□ -1.68
IFT43Q96FT9 MIR6830-201ENST00000636015 70 ntBASIC4.55□□□□□ -1.68
IFT43Q96FT9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
IFT43Q96FT9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
IFT43Q96FT9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
IFT43Q96FT9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
IFT43Q96FT9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.54□□□□□ -1.68
IFT43Q96FT9 BX322639.1-202ENST00000423987 2213 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
IFT43Q96FT9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.54□□□□□ -1.68
IFT43Q96FT9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.54□□□□□ -1.68
IFT43Q96FT9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.54□□□□□ -1.68
IFT43Q96FT9 Y_RNA.230-201ENST00000364348 109 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 RNU1-140P-201ENST00000365040 165 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 RNU1-100P-201ENST00000365255 165 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 Y_RNA.435-201ENST00000384095 112 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 RNU6-20P-201ENST00000384106 107 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 MIR329-1-201ENST00000385028 80 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.54□□□□□ -1.68
IFT43Q96FT9 AC007969.2-201ENST00000441891 191 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 AC125238.1-201ENST00000448842 249 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 HMGB3P8-201ENST00000449709 577 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 AC011276.1-201ENST00000469688 323 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 AC091959.1-201ENST00000495857 238 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 RNU6-567P-201ENST00000516746 107 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 RNU6-58P-201ENST00000517143 103 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.54□□□□□ -1.68
IFT43Q96FT9 MIR5571-201ENST00000577998 113 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 AC008749.1-201ENST00000597650 306 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 AC012468.1-201ENST00000604888 430 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 AC073349.3-201ENST00000617616 186 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.54□□□□□ -1.68
IFT43Q96FT9 AC022336.2-201ENST00000568966 2538 ntBASIC4.54□□□□□ -1.68
IFT43Q96FT9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.54□□□□□ -1.68
IFT43Q96FT9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
IFT43Q96FT9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
IFT43Q96FT9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
IFT43Q96FT9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
IFT43Q96FT9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.53□□□□□ -1.68
IFT43Q96FT9 Y_RNA.8-201ENST00000362353 102 ntBASIC4.53□□□□□ -1.68
IFT43Q96FT9 Y_RNA.136-201ENST00000363444 102 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms