Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AL161788.1-201ENST00000441805 169 ntBASIC2.87□□□□□ -1.95
SKA1Q96BD8 PRPS1P1-201ENST00000445305 876 ntBASIC2.87□□□□□ -1.95
SKA1Q96BD8 AL139109.1-201ENST00000455491 297 ntBASIC2.87□□□□□ -1.95
SKA1Q96BD8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.87□□□□□ -1.95
SKA1Q96BD8 SCARNA18-201ENST00000459004 134 ntBASIC2.87□□□□□ -1.95
SKA1Q96BD8 AC090515.1-201ENST00000465295 476 ntBASIC2.87□□□□□ -1.95
SKA1Q96BD8 AC133134.1-201ENST00000466800 359 ntBASIC2.87□□□□□ -1.95
SKA1Q96BD8 RPL23AP49-201ENST00000492925 468 ntBASIC2.87□□□□□ -1.95
SKA1Q96BD8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.87□□□□□ -1.95
SKA1Q96BD8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.87□□□□□ -1.95
SKA1Q96BD8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SKA1Q96BD8 ELOCP31-201ENST00000540463 467 ntBASIC2.87□□□□□ -1.95
SKA1Q96BD8 AGGF1P4-201ENST00000568249 801 ntBASIC2.87□□□□□ -1.95
SKA1Q96BD8 AP005136.1-201ENST00000579765 429 ntBASIC2.87□□□□□ -1.95
SKA1Q96BD8 AC090897.2-201ENST00000581715 130 ntBASIC2.87□□□□□ -1.95
SKA1Q96BD8 AC008752.3-201ENST00000588113 712 ntBASIC2.87□□□□□ -1.95
SKA1Q96BD8 Z69720.2-201ENST00000624755 279 ntBASIC2.87□□□□□ -1.95
SKA1Q96BD8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SKA1Q96BD8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SKA1Q96BD8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.86□□□□□ -1.95
SKA1Q96BD8 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.86□□□□□ -1.95
SKA1Q96BD8 MIR449A-201ENST00000362113 91 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 RNU6-552P-201ENST00000362869 119 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 SNORD56.1-201ENST00000362913 68 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 RNU6-1127P-201ENST00000384580 107 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 RN7SKP158-201ENST00000410453 326 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 AL663109.1-201ENST00000411498 844 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.86□□□□□ -1.95
SKA1Q96BD8 AL591043.1-201ENST00000432461 424 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.86□□□□□ -1.95
SKA1Q96BD8 AL451074.3-201ENST00000437709 472 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.86□□□□□ -1.95
SKA1Q96BD8 AP001025.1-201ENST00000486139 332 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 MTCO3P9-201ENST00000506989 781 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.86□□□□□ -1.95
SKA1Q96BD8 AC091133.4-201ENST00000511142 308 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 AP005435.4-201ENST00000529514 284 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 AL137161.1-201ENST00000532231 390 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SKA1Q96BD8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.86□□□□□ -1.95
SKA1Q96BD8 MTATP6P3-201ENST00000581686 676 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 AC004223.2-201ENST00000590309 544 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.86□□□□□ -1.95
SKA1Q96BD8 RPL30P11-203ENST00000598995 310 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 AC012507.3-201ENST00000603556 477 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 AL391646.1-201ENST00000603860 190 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 AP001596.2-201ENST00000608410 312 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SKA1Q96BD8 AC007792.1-201ENST00000623023 402 ntBASIC2.86□□□□□ -1.95
SKA1Q96BD8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.86□□□□□ -1.95
SKA1Q96BD8 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SKA1Q96BD8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SKA1Q96BD8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.85□□□□□ -1.95
SKA1Q96BD8 AC002543.1-201ENST00000299783 1954 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SKA1Q96BD8 RNU1-72P-201ENST00000362976 153 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 RNA5SP393-201ENST00000363423 117 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 RNU6-996P-201ENST00000365438 107 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 MIR186-201ENST00000384988 86 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 RNU6-903P-201ENST00000391270 109 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 AL591416.1-201ENST00000404015 867 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 RNU6-1140P-201ENST00000410517 106 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 RNU4-55P-201ENST00000410731 137 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 MTCO2P19-201ENST00000427513 598 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 MTND1P29-201ENST00000448112 647 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 TPT1P7-201ENST00000458300 517 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 RN7SL429P-201ENST00000479090 223 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.85□□□□□ -1.95
SKA1Q96BD8 RN7SL489P-201ENST00000486185 223 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 RN7SL327P-201ENST00000488659 223 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 MTCYBP40-201ENST00000509390 1135 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 RNU2-69P-201ENST00000516061 100 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 RNU2-53P-201ENST00000516257 147 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 RNU6-405P-201ENST00000516637 110 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 SNORA31.15-201ENST00000516771 132 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 AP003392.2-201ENST00000527269 208 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 CBX3P7-201ENST00000532876 502 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.85□□□□□ -1.95
SKA1Q96BD8 AC004486.1-201ENST00000546846 233 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.85□□□□□ -1.95
SKA1Q96BD8 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.85□□□□□ -1.95
SKA1Q96BD8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.85□□□□□ -1.95
SKA1Q96BD8 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.85□□□□□ -1.95
SKA1Q96BD8 AC087683.1-201ENST00000591187 441 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 AC091805.2-201ENST00000603848 235 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 Z82243.1-201ENST00000609432 473 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SKA1Q96BD8 RN7SL853P-201ENST00000617250 223 ntBASIC2.85□□□□□ -1.95
SKA1Q96BD8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SKA1Q96BD8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SKA1Q96BD8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
SKA1Q96BD8 AC062016.1-201ENST00000355719 319 ntBASIC2.84□□□□□ -1.95
SKA1Q96BD8 RNU6-527P-201ENST00000363425 104 ntBASIC2.84□□□□□ -1.95
SKA1Q96BD8 MIR524-201ENST00000385242 87 ntBASIC2.84□□□□□ -1.95
SKA1Q96BD8 RNU2-23P-201ENST00000410545 195 ntBASIC2.84□□□□□ -1.95
SKA1Q96BD8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.84□□□□□ -1.95
SKA1Q96BD8 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.84□□□□□ -1.95
SKA1Q96BD8 MTCO2P18-201ENST00000457151 658 ntBASIC2.84□□□□□ -1.95
SKA1Q96BD8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms