Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC114781.4-201ENST00000513707 639 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 AF235103.2-201ENST00000525753 346 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 AC006199.1-201ENST00000548728 219 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 LRRC37A5P-203ENST00000580181 585 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 AC123912.5-201ENST00000605470 343 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 AL357078.3-201ENST00000607528 618 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 MIR6852-201ENST00000621699 66 ntBASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.06□□□□□ -1.92
SH3KBP1Q96B97 RNU6-858P-201ENST00000362436 107 ntBASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 SNORA51.4-201ENST00000364993 124 ntBASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 SET-203ENST00000372688 801 ntTSL 2 BASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 MIR518D-201ENST00000385014 87 ntBASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 UBA52P6-201ENST00000399822 382 ntBASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 RPLP0P7-201ENST00000416050 667 ntBASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 AC096649.2-201ENST00000416186 393 ntBASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 RNU6-273P-201ENST00000516937 96 ntBASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 RN7SKP272-201ENST00000516988 232 ntBASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 SNORA25.17-201ENST00000517184 124 ntBASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 AC109329.2-201ENST00000519658 482 ntBASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 BNIP3P10-201ENST00000605360 577 ntBASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SH3KBP1Q96B97 AC000403.1-201ENST00000613696 3585 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 Y_RNA.160-201ENST00000363677 92 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 SNORA71.1-201ENST00000364523 117 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AL356776.1-201ENST00000406574 447 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 BMS1P22-201ENST00000414726 313 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AC244505.4-201ENST00000434905 287 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AL161651.1-201ENST00000440882 223 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 SSXP5-201ENST00000443473 287 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 NIPA2P5-201ENST00000452282 464 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AC007547.1-201ENST00000462177 490 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AC079140.5-201ENST00000507882 310 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AC116655.1-201ENST00000508324 901 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 MRPS36P2-201ENST00000512569 299 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 SNORA19.2-201ENST00000516013 114 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 SNORA14.1-201ENST00000516113 141 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 RNU6-323P-201ENST00000521915 107 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 UBL5P2-201ENST00000583788 219 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AC060780.3-201ENST00000589464 80 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AC087045.1-201ENST00000605856 382 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 RNU6-85P-201ENST00000605989 107 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AC093913.1-201ENST00000614178 329 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 RMST_4.1-201ENST00000616886 107 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 MIR6134-201ENST00000617606 109 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AC103705.1-201ENST00000619013 241 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 AC006504.8-201ENST00000621046 635 ntBASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SH3KBP1Q96B97 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 Y_RNA.167-201ENST00000363735 109 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 RNU6-82P-201ENST00000363970 107 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 RNU6-72P-201ENST00000384285 79 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 Y_RNA.480-201ENST00000384364 102 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 RNU6-750P-201ENST00000390946 107 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 RNU6-1148P-201ENST00000410992 104 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 RNA5SP344-201ENST00000411081 104 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 ARL5AP1-201ENST00000418991 388 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 AC103975.1-201ENST00000482506 483 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 AC116353.2-201ENST00000505332 712 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 PRDX4P1-201ENST00000507189 574 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 SNORD19.2-201ENST00000516978 73 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 SCARNA11.3-201ENST00000517276 130 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 AC022080.3-201ENST00000544433 482 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 MTCO3P23-201ENST00000561363 289 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 OR1M4P-201ENST00000589199 287 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 BNIP3P25-201ENST00000596023 559 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 APOOP1-201ENST00000604695 592 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 AC093732.2-201ENST00000607950 274 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.03□□□□□ -1.92
SH3KBP1Q96B97 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.03□□□□□ -1.93
SH3KBP1Q96B97 AC010889.1-201ENST00000566193 2666 ntBASIC3.02□□□□□ -1.93
SH3KBP1Q96B97 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.02□□□□□ -1.93
SH3KBP1Q96B97 U3.6-201ENST00000363622 211 ntBASIC3.02□□□□□ -1.93
SH3KBP1Q96B97 Y_RNA.500-201ENST00000384466 111 ntBASIC3.02□□□□□ -1.93
SH3KBP1Q96B97 SNORD73A-201ENST00000386062 65 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms