Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.23□□□□□ -2.21
TOPBP1Q92547 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.23□□□□□ -2.21
TOPBP1Q92547 AL353997.4-201ENST00000586196 166 ntBASIC1.23□□□□□ -2.21
TOPBP1Q92547 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.23□□□□□ -2.21
TOPBP1Q92547 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TOPBP1Q92547 RNU6-942P-201ENST00000363002 107 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 RNU6-16P-201ENST00000384385 107 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 RNU6-658P-201ENST00000384606 106 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 RSL24D1P8-201ENST00000434442 492 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 RSU1P2-202ENST00000437884 485 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.22□□□□□ -2.21
TOPBP1Q92547 AC112771.1-201ENST00000463581 102 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.22□□□□□ -2.21
TOPBP1Q92547 AC027338.1-201ENST00000514840 825 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 AC110760.3-202ENST00000515177 371 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.22□□□□□ -2.21
TOPBP1Q92547 AC026271.5-201ENST00000577873 130 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 MIR5708-201ENST00000579723 85 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 AC091057.3-201ENST00000602684 733 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 AC009974.1-201ENST00000608881 455 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.22□□□□□ -2.21
TOPBP1Q92547 AC008759.3-201ENST00000613300 508 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.22□□□□□ -2.21
TOPBP1Q92547 LINC02211-204ENST00000642024 1070 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 AL079343.1-201ENST00000572358 1771 ntBASIC1.22□□□□□ -2.21
TOPBP1Q92547 RNU6-343P-201ENST00000364709 104 ntBASIC1.21□□□□□ -2.22
TOPBP1Q92547 RNU6-1280P-201ENST00000365211 107 ntBASIC1.21□□□□□ -2.22
TOPBP1Q92547 MIR518A2-201ENST00000384966 87 ntBASIC1.21□□□□□ -2.22
TOPBP1Q92547 USP9YP26-201ENST00000421008 661 ntBASIC1.21□□□□□ -2.22
TOPBP1Q92547 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.21□□□□□ -2.22
TOPBP1Q92547 AC010153.1-201ENST00000432862 727 ntBASIC1.21□□□□□ -2.22
TOPBP1Q92547 COX7BP2-201ENST00000437976 242 ntBASIC1.21□□□□□ -2.22
TOPBP1Q92547 AC117503.1-201ENST00000472241 394 ntBASIC1.21□□□□□ -2.22
TOPBP1Q92547 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.21□□□□□ -2.22
TOPBP1Q92547 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.21□□□□□ -2.22
TOPBP1Q92547 RNU6-351P-201ENST00000516097 100 ntBASIC1.21□□□□□ -2.22
TOPBP1Q92547 AC104417.1-201ENST00000523974 751 ntBASIC1.21□□□□□ -2.22
TOPBP1Q92547 SLC2A13P1-201ENST00000531560 322 ntBASIC1.21□□□□□ -2.22
TOPBP1Q92547 OR6C7P-201ENST00000547875 934 ntBASIC1.21□□□□□ -2.22
TOPBP1Q92547 DUXAP1-201ENST00000556632 463 ntBASIC1.21□□□□□ -2.22
TOPBP1Q92547 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.21□□□□□ -2.22
TOPBP1Q92547 MIR3912-201ENST00000577566 105 ntBASIC1.21□□□□□ -2.22
TOPBP1Q92547 RNU6-105P-201ENST00000363909 104 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 SNORA25B-201ENST00000365507 128 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.2□□□□□ -2.22
TOPBP1Q92547 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.2□□□□□ -2.22
TOPBP1Q92547 RPL17P35-201ENST00000432217 549 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 AL353706.1-201ENST00000436728 494 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 MTATP6P30-201ENST00000443540 664 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 RPL18AP17-201ENST00000455326 198 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 AC010631.1-201ENST00000474150 156 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 AC026616.1-201ENST00000523157 525 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 SNRPGP1-201ENST00000553864 222 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.2□□□□□ -2.22
TOPBP1Q92547 AC009229.3-201ENST00000608056 282 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 RNU5E-1-201ENST00000362477 120 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 RNU6-748P-201ENST00000384648 107 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 AL079342.2-201ENST00000403367 482 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 MIR1302-8-201ENST00000408342 128 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.2□□□□□ -2.22
TOPBP1Q92547 MTND5P14-201ENST00000441481 1267 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 MTCO3P45-201ENST00000443036 613 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 AC020550.1-201ENST00000447385 163 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 MTND1P31-201ENST00000449206 961 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 KATNBL1P6-201ENST00000453433 915 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.2□□□□□ -2.22
TOPBP1Q92547 RPL30P6-201ENST00000475925 342 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.2□□□□□ -2.22
TOPBP1Q92547 AC034229.4-201ENST00000607861 441 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.2□□□□□ -2.22
TOPBP1Q92547 AC093875.1-201ENST00000623688 504 ntBASIC1.2□□□□□ -2.22
TOPBP1Q92547 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.19□□□□□ -2.22
TOPBP1Q92547 RPL36AP53-201ENST00000432891 316 ntBASIC1.19□□□□□ -2.22
TOPBP1Q92547 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.19□□□□□ -2.22
TOPBP1Q92547 AC139453.3-201ENST00000493276 369 ntBASIC1.19□□□□□ -2.22
TOPBP1Q92547 AC093809.1-201ENST00000509155 340 ntBASIC1.19□□□□□ -2.22
TOPBP1Q92547 AC008834.1-201ENST00000511612 175 ntBASIC1.19□□□□□ -2.22
TOPBP1Q92547 RNU5B-3P-201ENST00000516601 115 ntBASIC1.19□□□□□ -2.22
TOPBP1Q92547 RNU6-678P-201ENST00000516832 109 ntBASIC1.19□□□□□ -2.22
TOPBP1Q92547 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
TOPBP1Q92547 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.19□□□□□ -2.22
TOPBP1Q92547 BNIP3P25-201ENST00000596023 559 ntBASIC1.19□□□□□ -2.22
TOPBP1Q92547 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.19□□□□□ -2.22
TOPBP1Q92547 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.19□□□□□ -2.22
TOPBP1Q92547 AL355598.1-201ENST00000604169 202 ntBASIC1.19□□□□□ -2.22
TOPBP1Q92547 AC092192.1-201ENST00000633154 1018 ntBASIC1.19□□□□□ -2.22
TOPBP1Q92547 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TOPBP1Q92547 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TOPBP1Q92547 AL589826.1-201ENST00000340697 249 ntBASIC1.18□□□□□ -2.22
TOPBP1Q92547 RNU6-236P-201ENST00000363886 106 ntBASIC1.18□□□□□ -2.22
TOPBP1Q92547 SNORA8-201ENST00000384574 139 ntBASIC1.18□□□□□ -2.22
TOPBP1Q92547 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.18□□□□□ -2.22
TOPBP1Q92547 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.18□□□□□ -2.22
TOPBP1Q92547 AC000111.3-201ENST00000433478 193 ntBASIC1.18□□□□□ -2.22
TOPBP1Q92547 GTF2IP3-201ENST00000433887 494 ntBASIC1.18□□□□□ -2.22
TOPBP1Q92547 HSPE1P21-201ENST00000438283 308 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms