Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 ACA59.2-201ENST00000517061 156 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 AP005435.4-201ENST00000529514 284 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.38□□□□□ -2.19
LMX1AQ8TE12 HSBP1P1-201ENST00000555205 166 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 AC233702.2-202ENST00000562547 291 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.38□□□□□ -2.19
LMX1AQ8TE12 MIR4999-201ENST00000585029 91 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 BNIP3P40-201ENST00000596017 556 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 AC034229.4-201ENST00000607861 441 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 AC092106.3-201ENST00000611308 722 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 AL773524.1-201ENST00000614065 229 ntBASIC1.38□□□□□ -2.19
LMX1AQ8TE12 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.38□□□□□ -2.19
LMX1AQ8TE12 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
LMX1AQ8TE12 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
LMX1AQ8TE12 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 RNA5SP276-201ENST00000362580 94 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 U8.1-201ENST00000362843 134 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 RNY3P13-201ENST00000365542 102 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
LMX1AQ8TE12 RNU6-166P-201ENST00000384371 107 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 MIR518E-201ENST00000385252 88 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 RNU2-36P-201ENST00000410361 191 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 RNU2-62P-201ENST00000410868 191 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC127391.1-201ENST00000411737 98 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AL354692.1-201ENST00000423044 315 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AL161788.1-201ENST00000441805 169 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.37□□□□□ -2.19
LMX1AQ8TE12 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.37□□□□□ -2.19
LMX1AQ8TE12 MTND1P3-201ENST00000484956 952 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC023194.1-201ENST00000493084 308 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC104685.1-201ENST00000502445 371 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC109927.2-201ENST00000506416 303 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.37□□□□□ -2.19
LMX1AQ8TE12 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
LMX1AQ8TE12 SMURF2P1-201ENST00000514992 481 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 RNU6-572P-201ENST00000516724 80 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 RNU6-678P-201ENST00000516832 109 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC107934.1-201ENST00000522215 217 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC107953.1-201ENST00000522216 297 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AP005639.2-201ENST00000527592 928 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC123904.2-201ENST00000548059 300 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.37□□□□□ -2.19
LMX1AQ8TE12 MIR4782-201ENST00000577987 79 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 MIR1273C-201ENST00000578669 77 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AL078605.1-201ENST00000603529 500 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.37□□□□□ -2.19
LMX1AQ8TE12 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC021755.4-201ENST00000616620 456 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.37□□□□□ -2.19
LMX1AQ8TE12 Z99571.1-201ENST00000636677 394 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 U6.99-201ENST00000637524 83 ntBASIC1.37□□□□□ -2.19
LMX1AQ8TE12 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.37□□□□□ -2.19
LMX1AQ8TE12 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
LMX1AQ8TE12 MTND4P16-201ENST00000466108 1367 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 RNU6-288P-201ENST00000363690 104 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 U3.13-201ENST00000364804 214 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 RNU6-1280P-201ENST00000365211 107 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 Y_RNA.508-201ENST00000384502 114 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 RNU6-997P-201ENST00000384725 107 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 MIR301A-201ENST00000385261 86 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 SNORD115.1-201ENST00000391109 76 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 MIR1302-8-201ENST00000408342 128 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.36□□□□□ -2.19
LMX1AQ8TE12 ELOCP17-201ENST00000414751 326 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AC244636.1-201ENST00000421152 228 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.36□□□□□ -2.19
LMX1AQ8TE12 MTND2P29-201ENST00000438595 412 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 CR769776.1-201ENST00000441254 787 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AC003071.1-201ENST00000451219 789 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 RPL36AP48-201ENST00000485521 314 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 RPS3AP22-201ENST00000488297 769 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AC091951.3-201ENST00000504093 246 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.36□□□□□ -2.19
LMX1AQ8TE12 RNU6-143P-201ENST00000516942 93 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 RNU6-1092P-201ENST00000516955 87 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 RNU6-1315P-201ENST00000517187 99 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 MTATP6P15-201ENST00000527233 835 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.36□□□□□ -2.19
LMX1AQ8TE12 MIR3118-1-201ENST00000581787 76 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AL031274.2-201ENST00000599419 203 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AC091895.1-201ENST00000624494 256 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AC103706.2-201ENST00000638080 240 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AC233981.2-201ENST00000611524 1614 ntBASIC1.36□□□□□ -2.19
LMX1AQ8TE12 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
LMX1AQ8TE12 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LMX1AQ8TE12 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms